RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 ADARB2Q9NS39 739 aaKnown RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 COQ3Q9NZJ6 369 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 RABL2AQ9UBK7 228 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 AFF4Q9UHB7 1163 aaKnown RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 CRLS1Q9UJA2 301 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 FBXO9Q9UK97 447 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 ADAM30Q9UKF2 790 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 FBXW2Q9UKT8 454 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 A4GNTQ9UNA3 340 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 EXOGQ9Y2C4 368 aaKnown RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 CACNG2Q9Y698 323 aa6.56□□□□□ -1.36
CPSF7-215ENST00000536145 DNMT3AQ9Y6K1 912 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-215ENST00000536145 POLR2AP24928 1970 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 A0A0G2JK05 382 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GLYATL1P3A0A0U1RQE8 302 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 A0A0U1RQF3 1178 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 A8MXK9 166 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GPR171O14626 319 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CASKO14936 926 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 PRODHO43272 600 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SGTAO43765 313 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 HYAL3O43820 417 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TBX19O60806 448 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NCR1O76036 304 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SOX30O94993 753 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DHFRP00374 187 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IGHA1P01876 353 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 KLKB1P03952 638 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TCRBP04435 133 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IFNA16P05015 189 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 H1F0P07305 194 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CHRM5P08912 532 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ANXA4P09525 319 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ACSM4P0C7M7 580 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NR2F6P10588 404 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DRD2P14416 443 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 HOXB3P14651 431 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 HOXB1P14653 301 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NPR2P20594 1047 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CALCRP30988 508 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CHI3L1P36222 383 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NSG1P42857 185 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 KCNJ5P48544 419 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GIPRP48546 466 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MTNR1BP49286 362 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 PNLIPRP1P54315 467 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ZP1P60852 638 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DSTNP60981 165 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IRF8Q02556 426 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TAP2Q03519 686 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 C2orf80Q0P641 193 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 RAB40BQ12829 278 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 COX10Q12887 443 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF177Q13360 481 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IL18Q14116 193 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GINS1Q14691 196 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NDUFA9Q16795 377 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ST3GAL2Q16842 350 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NHLRC3Q5JS37 347 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 PLEKHS1Q5SXH7 462 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DCST1Q5T197 706 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 BCL2L15Q5TBC7 163 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 AADACL4Q5VUY2 407 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SHEQ5VZ18 495 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 ADNP2Q6IQ32 1131 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SLC30A6Q6NXT4 461 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TRIM40Q6P9F5 258 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CASP12Q6UXS9 341 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GPR142Q7Z601 462 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TLK2Q86UE8 772 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 THOC6Q86W42 341 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DENND1CQ8IV53 801 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GPR135Q8IZ08 494 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 LINC00518Q8N0U6 118 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MS4A15Q8N5U1 240 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 IQCF1Q8N6M8 205 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 CELF5Q8N6W0 485 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 DTX3Q8N9I9 347 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 POGLUT1Q8NBL1 392 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MORN4Q8NDC4 146 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 GPR26Q8NDV2 337 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 TRPV1Q8NER1 839 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 OR2T4Q8NH00 348 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 OR52N1Q8NH53 320 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 OR56A3Q8NH54 315 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 SP7Q8TDD2 431 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 WBP2Q969T9 261 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MARC2Q969Z3 335 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 RFT1Q96AA3 541 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 KCTD12Q96CX2 325 aaKnown RBP6.55□□□□□ -1.36
CPSF7-215ENST00000536145 NXPE2Q96DL1 559 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MTERF3Q96E29 417 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 WDR34Q96EX3 536 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 MS4A3Q96HJ5 214 aa6.55□□□□□ -1.36
CPSF7-215ENST00000536145 HIST1H2AHQ96KK5 128 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms