RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CNIH2Q6PI25 160 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 CCDC116Q8IYX3 515 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 SLC5A11Q8WWX8 675 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 LGR4Q9BXB1 951 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 OR51I1Q9H343 314 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 KLHL31Q9H511 634 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 FBXW2Q9UKT8 454 aa13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 LSM2Q9Y333 95 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-203ENST00000535479 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OR1F1O43749 312 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 LANCL1O43813 399 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 UGT2B17O75795 530 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ARAFP10398 606 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OSMP13725 252 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 SP3Q02447 781 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 GPAT3Q53EU6 434 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 HENMT1Q5T8I9 393 aaKnown RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 KIF18BQ86Y91 864 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OXR1Q8N573 874 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OR8D4Q8NGM9 314 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 SNAPC3Q92966 411 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 EFHD2Q96C19 240 aaPredicted RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ORAI1Q96D31 301 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 DEFB118Q96PH6 123 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 MCUBQ9NWR8 336 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 MRPS7Q9Y2R9 242 aaKnown RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 PLEKHM1Q9Y4G2 1056 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 SNRNP200O75643 2136 aaKnown RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 HIDE1A8MVS5 230 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 NPIPB8E9PQR5 432 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 PAHP00439 452 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 RHCEP18577 417 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 VIPR1P32241 457 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 GPR1P46091 355 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 LIMK1P53667 647 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 CDK10Q15131 360 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 BTBD16Q32M84 506 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 PIP5KL1Q5T9C9 394 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 LIPIQ6XZB0 460 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ESPNLQ6ZVH7 1005 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 VRK2Q86Y07 508 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM9CQ8IZT9 166 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 BEST4Q8NFU0 473 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 OR56A3Q8NH54 315 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 GRPEL2Q8TAA5 225 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ZBED6CLQ96FA7 236 aaPredicted RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ISG20L2Q9H9L3 353 aaKnown RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ZCCHC3Q9NUD5 404 aaKnown RBP13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 KLK4Q9Y5K2 254 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ALG5Q9Y673 324 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 HEATR5BQ9P2D3 2071 aa13.14□□□□□ -0.31
LPCAT3-203ENST00000535479 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC5A10A0PJK1 596 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM25AB3EWG3 89 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM25CB3EWG5 89 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM25GB3EWG6 89 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SOX9P48436 509 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SMSP52788 366 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 ID2Q02363 134 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 OR4N5Q8IXE1 308 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC7A6Q92536 515 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 PIK3R3Q92569 461 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 GCDHQ92947 438 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 TBC1D20Q96BZ9 403 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SENP5Q96HI0 755 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FCRL1Q96LA6 429 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 CDCA4Q9BXL8 241 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 CCDC177Q9NQR7 707 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 CRNNQ9UBG3 495 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 PGRMC2O15173 223 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 EPPINO95925 133 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 ITGA2P17301 1181 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 TBXA2RP21731 343 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 LIMS1P48059 325 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC6A11P48066 632 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 CCT3P49368 545 aaKnown RBP13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 OLR1P78380 273 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 EFR3AQ14156 821 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FBXO43Q4G163 708 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM209AQ5JX71 171 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 NXPE4Q6UWF7 544 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 RFPL4BQ6ZWI9 263 aa13.13□□□□□ -0.31
LPCAT3-203ENST00000535479 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms