RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	OARD1	Q9Y530	152 aa		11.36	□□□□□ -0.59
CAPN1-223	ENST00000533079	ACTL7B	Q9Y614	415 aa		11.36	□□□□□ -0.59
CAPN1-223	ENST00000533079	ZAN	Q9Y493	2812 aa		11.36	□□□□□ -0.59
CAPN1-223	ENST00000533079	EML6	Q6ZMW3	1958 aa		11.36	□□□□□ -0.59
CAPN1-223	ENST00000533079	ATR	Q13535	2644 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	RNF212B	A8MTL3	300 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	WDR47	O94967	919 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	RCBTB2	O95199	551 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	CNOT4	O95628	575 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	TBX6	O95947	436 aa	Predicted RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	IFNA2	P01563	188 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	CYP4B1	P13584	511 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	CPN1	P15169	458 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	PAX1	P15863	534 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	ZNF37A	P17032	561 aa	Predicted RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	MC3R	P41968	323 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	SLC6A12	P48065	614 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	MASP1	P48740	699 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	AGFG1	P52594	562 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	GPX6	P59796	221 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	FRG1	Q14331	258 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	EBP	Q15125	230 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	C3orf62	Q6ZUJ4	267 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	PACS2	Q86VP3	889 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	C9orf106	Q8NAJ2	232 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	UCN3	Q969E3	161 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	ABTB1	Q969K4	478 aa	Predicted RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	RBM18	Q96H35	190 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	SIGLEC10	Q96LC7	697 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	RILP	Q96NA2	401 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	UCN2	Q96RP3	112 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	EGFL8	Q99944	293 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	TBCD	Q9BTW9	1192 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	WWTR1	Q9GZV5	400 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	ACSS3	Q9H6R3	686 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	CNOT10	Q9H9A5	744 aa	Known RBP	11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	PRDM7	Q9NQW5	492 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	SNX15	Q9NRS6	342 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	MS4A12	Q9NXJ0	267 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	NPFFR2	Q9Y5X5	522 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	CUBN	O60494	3623 aa		11.35	□□□□□ -0.59
CAPN1-223	ENST00000533079	IQANK1	A0A1B0GTG1	560 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	MYOCOS	A0A1B0GUC4	107 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079		A8MXE2	369 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	DEFB108A	A8MXU0	73 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	GOLGA8M	H3BSY2	632 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	SHOX2	O60902	331 aa	Predicted RBP	11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	AHSG	P02765	367 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	CRYGS	P22914	178 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	CHM	P24386	653 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	GABRB3	P28472	473 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ELK3	P41970	407 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	PTH2R	P49190	550 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	SLC18A1	P54219	525 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	DMTN	Q08495	405 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	FASTKD3	Q14CZ7	662 aa	Known RBP	11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	SPANXN3	Q5MJ09	141 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	RNF111	Q6ZNA4	994 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	FRA10AC1	Q70Z53	315 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	VN1R5	Q7Z5H4	357 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ADGRE4P	Q86SQ3	457 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ADAMTSL2	Q86TH1	951 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	PHC2	Q8IXK0	858 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	AGGF1	Q8N302	714 aa	eCLIP	11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	NKAP	Q8N5F7	415 aa	Known RBP	11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ZNF441	Q8N8Z8	693 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	FBXO36	Q8NEA4	188 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	PPP1R14C	Q8TAE6	165 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	TMEM158	Q8WZ71	300 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	WNT2B	Q93097	391 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	TMEM41A	Q96HV5	264 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	GAL3ST4	Q96RP7	486 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	EFCAB11	Q9BUY7	163 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	ANGPTL4	Q9BY76	406 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	UBTD1	Q9HAC8	227 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	SENP1	Q9P0U3	644 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	VWA7	Q9Y334	891 aa		11.34	□□□□□ -0.59
CAPN1-223	ENST00000533079	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	TLDC2	A0PJX2	215 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	MSTN	O14793	375 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	CLGN	O14967	610 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	FGF17	O60258	216 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	ALOX15	P16050	662 aa	Predicted RBP	11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	HIST1H1T	P22492	207 aa	Predicted RBP	11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	CPN2	P22792	545 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	ATP5A1	P25705	553 aa	Known RBP	11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	STX2	P32856	288 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	GALNS	P34059	522 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	CPOX	P36551	454 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	SLC37A1	P57057	533 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	MAGOH	P61326	146 aa	Known RBP	11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	FOXF2	Q12947	444 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	LAPTM5	Q13571	262 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	TOMM20	Q15388	145 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	TMEM35A	Q53FP2	167 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	PAGE2B	Q5JRK9	111 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	DCST1	Q5T197	706 aa		11.33	□□□□□ -0.6
CAPN1-223	ENST00000533079	UBAP2	Q5T6F2	1119 aa	Known RBP	11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms