RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ATG4BQ9Y4P1 393 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 LOC390937A0A1W2PQ73 354 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF724A8MTY0 619 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.77□□□□□ -1.81
C11orf88-204ENST00000529661 NEDD8-MDP1E9PL57 170 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 SH2D1BO14796 132 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 NOL3O60936 208 aaKnown RBP3.77□□□□□ -1.81
C11orf88-204ENST00000529661 ANXA9O76027 345 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 RALAP11233 206 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 KLHL30Q0D2K2 578 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 LRRC74AQ0VAA2 488 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 CALCOCO2Q13137 446 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 NME3Q13232 169 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 SCGB2A2Q13296 93 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 NFATC2Q13469 925 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 LY6DQ14210 128 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 DCAF12Q5T6F0 453 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 LIPKQ5VXJ0 399 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF613Q6PF04 617 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 METTL7BQ6UX53 244 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 GDPGP1Q6ZNW5 385 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 ASRGL1Q7L266 308 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 AMZ2Q86W34 360 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 CARM1Q86X55 608 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 TBC1D21Q8IYX1 336 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 METTL4Q8N3J2 472 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 RELL2Q8NC24 303 aaPredicted RBP3.77□□□□□ -1.81
C11orf88-204ENST00000529661 CHDHQ8NE62 594 aaPredicted RBP3.77□□□□□ -1.81
C11orf88-204ENST00000529661 OR52B4Q8NGK2 314 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 CCDC110Q8TBZ0 833 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 RDH11Q8TC12 318 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 RBM4BQ9BQ04 359 aaKnown RBP3.77□□□□□ -1.81
C11orf88-204ENST00000529661 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 STARD5Q9NSY2 213 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 THYN1Q9P016 225 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 ANKMY1Q9P2S6 941 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 AURKCQ9UQB9 309 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 SLC6A5Q9Y345 797 aa3.77□□□□□ -1.81
C11orf88-204ENST00000529661 MYH15Q9Y2K3 1946 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 SYNJ2O15056 1496 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 IGHV4-30-2A0A087WSY4 118 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ARHGEF33A8MVX0 844 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 E9PQ18 207 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 FBP2O00757 339 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 AKR7A3O95154 331 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 APBB3O95704 486 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 HPRP00739 348 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 TRIM49P0CI25 452 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 TRIM49CP0CI26 452 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 IL4RP24394 825 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 PPP2R1AP30153 589 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 PRDX2P32119 198 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ID1P41134 155 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 MAGEA4P43358 317 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 BTG3Q14201 252 aaPredicted RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 FASTKD3Q14CZ7 662 aaKnown RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF146Q15072 292 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 HAGHQ16775 308 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 SHROOM1Q2M3G4 852 aaPredicted RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 HKDC1Q2TB90 917 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 LRIT3Q3SXY7 679 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 DDI2Q5TDH0 399 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 STEAP1BQ6NZ63 245 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 KDELC1Q6UW63 502 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 CWC27Q6UX04 472 aaKnown RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 PPP1R42Q7Z4L9 355 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 BCORP1Q8N888 145 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF397Q8NF99 534 aaPredicted RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 OR4F5Q8NH21 305 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 SYAP1Q96A49 352 aaPredicted RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 NABP1Q96AH0 204 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 LGMNQ99538 433 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 NLNQ9BYT8 704 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 NT5C3AQ9H0P0 336 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 RWDD1Q9H446 243 aaPredicted RBP3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ATXN10Q9UBB4 475 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 EXTL2Q9UBQ6 330 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 BCAP29Q9UHQ4 241 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF175Q9Y473 711 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 SMAD5-AS1Q9Y6J3 95 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 AP1M2Q9Y6Q5 423 aa3.76□□□□□ -1.81
C11orf88-204ENST00000529661 A0A0A6YYD4 124 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 IGLON5A6NGN9 336 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 E9PMD0 336 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 K7EQG2 157 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 SGK494L7N484 410 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 BUB1O43683 1085 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 SNAP91O60641 907 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 FRAT2O75474 233 aaPredicted RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 STK17BO94768 372 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 DIRAS3O95661 229 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 UGT1A4P22310 534 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 TMOD1P28289 359 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 PTPN6P29350 595 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 MDH1P40925 334 aaKnown RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 MATKP42679 507 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 SGSHP51688 502 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 LMO4P61968 165 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 FKBP3Q00688 224 aaKnown RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 NAAAQ02083 359 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms