RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 A0A0G2JND7 137 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 E9PBE3 544 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 CLPSP04118 112 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 CT62P0C5K7 136 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 FAM87AP0C7U9 286 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 LAMP1P11279 417 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 LSP1P33241 339 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 SOX18P35713 384 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 MFAP5Q13361 173 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 MEP1AQ16819 746 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 PCSK4Q6UW60 755 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 MIER2Q8N344 545 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 KIF2BQ8N4N8 673 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 ZNF615Q8N8J6 731 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 C9orf43Q8TAL5 461 aaPredicted RBP19.29■□□□□ 0.68
CD44-222ENST00000526025 CIDECQ96AQ7 238 aaPredicted RBP19.29■□□□□ 0.68
CD44-222ENST00000526025 ZBTB18Q99592 522 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 DUSP26Q9BV47 211 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 RNF32Q9H0A6 362 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 MRGBPQ9NV56 204 aa19.29■□□□□ 0.68
CD44-222ENST00000526025 FAM208BQ5VWN6 2430 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 HRKO00198 91 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 RNASET2O00584 256 aaKnown RBP19.28■□□□□ 0.68
CD44-222ENST00000526025 ATXN7O15265 892 aaPredicted RBP19.28■□□□□ 0.68
CD44-222ENST00000526025 KIR3DL1P43629 444 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 STX1BP61266 288 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 UFM1P61960 85 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 RNF4P78317 190 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 LTB4RQ15722 352 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 RPS19BP1Q86WX3 136 aaKnown RBP19.28■□□□□ 0.68
CD44-222ENST00000526025 ZNF321PQ8N8H1 164 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 EXD3Q8N9H8 876 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 C17orf47Q8NEP4 570 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 ADCY4Q8NFM4 1077 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 PSMA8Q8TAA3 256 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 OR5P2Q8WZ92 322 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 TM9SF4Q92544 642 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 TMEM120AQ9BXJ8 343 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 OR10A5Q9H207 317 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 NEUROD4Q9HD90 331 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 PTGFRNQ9P2B2 879 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
CD44-222ENST00000526025 PRAMEF2O60811 474 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 SLC22A3O75751 556 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 CBX7O95931 251 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 SSTR4P31391 388 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ARFIP2P53365 341 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 MANFP55145 182 aaKnown RBP19.27■□□□□ 0.68
CD44-222ENST00000526025 MLF1P58340 268 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 LRRC74AQ0VAA2 488 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ACER2Q5QJU3 275 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 FHL5Q5TD97 284 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ABHD17BQ5VST6 288 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ANXA8L1Q5VT79 327 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 FAM111BQ6SJ93 734 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 SLC29A4Q7RTT9 530 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 C9orf40Q8IXQ3 194 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 OR2L13Q8N349 312 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 SIRT6Q8N6T7 355 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ELP4Q96EB1 424 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 THOC1Q96FV9 657 aaKnown RBP19.27■□□□□ 0.68
CD44-222ENST00000526025 NSRP1Q9H0G5 558 aaKnown RBP19.27■□□□□ 0.68
CD44-222ENST00000526025 EPS8L2Q9H6S3 715 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 FAM120CQ9NX05 1096 aaKnown RBP19.27■□□□□ 0.68
CD44-222ENST00000526025 NTMQ9P121 344 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ABI3Q9P2A4 366 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 PRODH2Q9UF12 536 aa19.27■□□□□ 0.68
CD44-222ENST00000526025 ATRXP46100 2492 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 A0A1W2PRB8 838 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 A8MUI8 341 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 COQ9O75208 318 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 PSMG1O95456 288 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 IL6P05231 212 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 GYS2P54840 703 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 WNT3P56703 355 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 GNGT1P63211 74 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 RAPSNQ13702 412 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 SQLEQ14534 574 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 EBPQ15125 230 aaKnown RBP19.26■□□□□ 0.67
CD44-222ENST00000526025 TRMT12Q53H54 448 aaKnown RBP19.26■□□□□ 0.67
CD44-222ENST00000526025 LACTB2Q53H82 288 aaPredicted RBP19.26■□□□□ 0.67
CD44-222ENST00000526025 MSANTD1Q6ZTZ1 278 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 ZNF551Q7Z340 670 aaPredicted RBP19.26■□□□□ 0.67
CD44-222ENST00000526025 AMER2Q8N7J2 671 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 VPS37AQ8NEZ2 397 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 TP53INP1Q96A56 240 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 MARK4Q96L34 752 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 TEX37Q96LM6 180 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 RILPQ96NA2 401 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 NPAS2Q99743 824 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 RABEP2Q9H5N1 569 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 MYOTQ9UBF9 498 aa19.26■□□□□ 0.67
CD44-222ENST00000526025 C19orf53Q9UNZ5 99 aaPredicted RBP19.26■□□□□ 0.67
CD44-222ENST00000526025 SPTA1P02549 2419 aa19.25■□□□□ 0.67
CD44-222ENST00000526025 PRSS51A0A1B0GVH4 220 aa19.25■□□□□ 0.67
CD44-222ENST00000526025 GMNCA6NCL1 334 aa19.25■□□□□ 0.67
CD44-222ENST00000526025 TMEM200CA6NKL6 621 aa19.25■□□□□ 0.67
CD44-222ENST00000526025 FCHO1O14526 889 aa19.25■□□□□ 0.67
CD44-222ENST00000526025 PRKNO60260 465 aaPredicted RBP19.25■□□□□ 0.67
CD44-222ENST00000526025 SCN2BO60939 215 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms