RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ANKRD33BA6NCL7 494 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 PLOD2O00469 737 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CCNT2O60583 730 aaKnown RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 TNFSF13O75888 250 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CLPSP04118 112 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CD22P20273 847 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CNTFP26441 200 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CCKARP32238 428 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 UGT2B10P36537 528 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 MAGEA6P43360 314 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 SLC6A12P48065 614 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 HNMTP50135 292 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF75DP51815 510 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 HNRNPH2P55795 449 aaKnown RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 NRG3P56975 720 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 PCDH1Q08174 1060 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 GAB1Q13480 694 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CAPRIN1Q14444 709 aaKnown RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 HIST2H2ACQ16777 129 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CHRFAM7AQ494W8 412 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 HIST2H2AA3Q6FI13 130 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF474Q6S9Z5 364 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 C22orf34Q6ZV56 151 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CHMP1BQ7LBR1 199 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 IFNEQ86WN2 208 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 MCUQ8NE86 351 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ANKRD49Q8WVL7 239 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 WNT2BQ93097 391 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 STARD4Q96DR4 205 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CERS2Q96G23 380 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ZFP3Q96NJ6 502 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 TMEM79Q9BSE2 394 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 G6PC3Q9BUM1 346 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 MS4A8Q9BY19 250 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 REG4Q9BYZ8 158 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 RBSNQ9H1K0 784 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 NT5DC2Q9H857 520 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 SNX15Q9NRS6 342 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 LAMP3Q9UQV4 416 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 ABCA1O95477 2261 aa10.55□□□□□ -0.72
SDCBP-211ENST00000523441 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 MSTNO14793 375 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TAPBPO15533 448 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF37AP17032 561 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 GSTM2P28161 218 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TLX1P31314 330 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TMED10P49755 219 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 RPP38P78345 283 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 IGLV3-21P80748 117 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 OCRLQ01968 901 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TNFRSF17Q02223 184 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 IRF8Q02556 426 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 CHIT1Q13231 466 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 SPANXN3Q5MJ09 141 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ARMC3Q5W041 872 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 OR5M10Q6IEU7 315 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 OR4C11Q6IEV9 310 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TRMT10BQ6PF06 316 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF704Q6ZNC4 412 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 GPR180Q86V85 440 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 MYLK4Q86YV6 388 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 HIPK1Q86Z02 1210 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ST13P4Q8IZP2 240 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 SRFBP1Q8NEF9 429 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TANKQ92844 425 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 MAGOHBQ96A72 148 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 PTCD3Q96EY7 689 aaKnown RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ZBED6CLQ96FA7 236 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 TMEM41AQ96HV5 264 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 ZNF845Q96IR2 970 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-211ENST00000523441 VPS39Q96JC1 886 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 SFXN2Q96NB2 322 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 NODALQ96S42 347 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 HEY2Q9UBP5 337 aa10.54□□□□□ -0.72
SDCBP-211ENST00000523441 FAM95CA0A1B0GW59 222 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 OR6C76A6NM76 312 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 ICOSLGO75144 302 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 GPR75O95800 540 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 F12P00748 615 aaPredicted RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 GBAP04062 536 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CT62P0C5K7 136 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CPN1P15169 458 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 ACVR1BP36896 505 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 CDKN1AP38936 164 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 BUD31P41223 144 aaPredicted RBP10.53□□□□□ -0.72
SDCBP-211ENST00000523441 MAGEA3P43357 314 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 TGFBIQ15582 683 aa10.53□□□□□ -0.72
SDCBP-211ENST00000523441 PDK4Q16654 411 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms