RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 C2orf80Q0P641 193 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 MAP4K2Q12851 820 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 MPP2Q14168 576 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 LTB4RQ15722 352 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 FAM71E1Q6IPT2 247 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 LYPD8Q6UX82 237 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 GFRALQ6UXV0 394 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 RTL4Q6ZR62 310 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 SIAH3Q8IW03 269 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF441Q8N8Z8 693 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 LRTM1Q9HBL6 345 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 MYNNQ9NPC7 610 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 PFDN4Q9NQP4 134 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 DEPPQ9NTK1 212 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 EHD3Q9NZN3 535 aa19.08■□□□□ 0.64
TRIM35-203ENST00000521253 USP9YO00507 2555 aaPredicted RBP19.07■□□□□ 0.64
TRIM35-203ENST00000521253 NPIPA5E9PKD4 350 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 PIP5K1BO14986 540 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 TM9SF1O15321 606 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 MYZAPP0CAP1 466 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF24P17028 368 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 RFC3P40938 356 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 DUSP8Q13202 625 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF791Q3KP31 576 aaPredicted RBP19.07■□□□□ 0.64
TRIM35-203ENST00000521253 CES4AQ5XG92 561 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 HOMEZQ8IX15 550 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 DDIASQ8IXT1 998 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 CCDC116Q8IYX3 515 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 SAMD14Q8IZD0 417 aaPredicted RBP19.07■□□□□ 0.64
TRIM35-203ENST00000521253 SLC15A4Q8N697 577 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 GOLM1Q8NBJ4 401 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 POGLUT1Q8NBL1 392 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 C16orf52Q8NHV5 167 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 CTHRC1Q96CG8 243 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 SGCZQ96LD1 299 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 GPR137Q96N19 417 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 KCNK9Q9NPC2 374 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 SLC35C2Q9NQQ7 365 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF639Q9UID6 485 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 ERRFI1Q9UJM3 462 aaPredicted RBP19.07■□□□□ 0.64
TRIM35-203ENST00000521253 NPIPA1Q9UND3 350 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 ENTPD4Q9Y227 616 aa19.07■□□□□ 0.64
TRIM35-203ENST00000521253 WBP11Q9Y2W2 641 aaKnown RBP19.07■□□□□ 0.64
TRIM35-203ENST00000521253 DOPEY2Q9Y3R5 2298 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 A0A0G2JMM0 328 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 A0A1W2PPB8 328 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 A0A1W2PRS3 328 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 KIR3DP1A8MWS1 328 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 G3V3Y1 287 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 BIRC5O15392 142 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 ZWINTO95229 277 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 CBX7O95931 251 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 DHRS4L1P0CG22 281 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 TACR1P25103 407 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 NR0B1P51843 470 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 MRPS35P82673 323 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 EXOSC7Q15024 291 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 CEBPEQ15744 281 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 CHI3L2Q15782 390 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 PRSS53Q2L4Q9 553 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 TRMT12Q53H54 448 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 HLA-DQA1Q5Y7H0 255 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 TICAM1Q8IUC6 712 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 ZFP62Q8NB50 900 aaPredicted RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 SIMC1Q8NDZ2 872 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 PPP1R14CQ8TAE6 165 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 ADIPOR1Q96A54 375 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 TP53INP1Q96A56 240 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 SPACA9Q96E40 222 aaPredicted RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 GIMAP4Q9NUV9 329 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 BCAP29Q9UHQ4 241 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 ZDHHC2Q9UIJ5 367 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 EXO1Q9UQ84 846 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 DTX4Q9Y2E6 619 aa19.06■□□□□ 0.64
TRIM35-203ENST00000521253 SPTAN1Q13813 2472 aaKnown RBP19.06■□□□□ 0.64
TRIM35-203ENST00000521253 PINLYPA6NC86 204 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 LSM1O15116 133 aaKnown RBP19.05■□□□□ 0.64
TRIM35-203ENST00000521253 FBXO45P0C2W1 286 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 RNF224P0DH78 156 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 CCL3P10147 92 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 PCSK2P16519 638 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 GPX3P22352 226 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 RPL38P63173 70 aaKnown RBP19.05■□□□□ 0.64
TRIM35-203ENST00000521253 RFTN2Q52LD8 501 aaPredicted RBP19.05■□□□□ 0.64
TRIM35-203ENST00000521253 KRTCAP3Q53RY4 240 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF628Q5EBL2 1059 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 IKBIPQ70UQ0 350 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 TAGAPQ8N103 731 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 OR52R1Q8NGF1 315 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 OR9A2Q8NGT5 310 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 ZNF675Q8TD23 568 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 EGLN2Q96KS0 407 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 FCRL1Q96LA6 429 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 SH2D2AQ9NP31 389 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 MIEF1Q9NQG6 463 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 SLC5A6Q9Y289 635 aa19.05■□□□□ 0.64
TRIM35-203ENST00000521253 UTP20O75691 2785 aaKnown RBP19.05■□□□□ 0.64
TRIM35-203ENST00000521253 ZGRF1Q86YA3 2104 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 ITM2AO43736 263 aa19.04■□□□□ 0.64
TRIM35-203ENST00000521253 LYPLA1O75608 230 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms