RNA–Protein interactions for RNA: ENST00000521000.1

PTK2B-213, Transcript of protein tyrosine kinase 2 beta, human

TSL 3

Gene PTK2B, Length 557 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2B-213	ENST00000521000	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	GID8	Q9NWU2	228 aa		13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	PTGFRN	Q9P2B2	879 aa		13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	BCAP29	Q9UHQ4	241 aa		13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	ERVK-19	Q9WJR5	959 aa		13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	PCDHB14	Q9Y5E9	798 aa		13.58	□□□□□ -0.24
PTK2B-213	ENST00000521000	IGHV1-45	A0A0A0MS14	117 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	SAGE2P	A6NJ88	616 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000		B2RBV5	119 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	HRK	O00198	91 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	PEX12	O00623	359 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	EMC8	O43402	210 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	PLOD3	O60568	738 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	NPPA	P01160	153 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ZCCHC18	P0CG32	403 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	S1PR1	P21453	382 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	SOX18	P35713	384 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	CHI3L1	P36222	383 aa	Predicted RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	NUDT2	P50583	147 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	PRR5	P85299	388 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	CAPRIN1	Q14444	709 aa	Known RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	EXOSC7	Q15024	291 aa	Known RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	PCOLCE	Q15113	449 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	SPRED3	Q2MJR0	410 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	LRIF1	Q5T3J3	769 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	DLEU7	Q6UYE1	221 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	NDUFAF7	Q7L592	441 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ERMP1	Q7Z2K6	904 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR11G2	Q8NGC1	345 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR5AK3P	Q8NH89	298 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	SLC2A12	Q8TD20	617 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ROPN1L	Q96C74	230 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ART5	Q96L15	291 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	PHF12	Q96QT6	1004 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	WDR77	Q9BQA1	342 aa	Predicted RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	SLC35A5	Q9BS91	424 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	TRIM4	Q9C037	500 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ANKRA2	Q9H9E1	313 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	DDX18	Q9NVP1	670 aa	Known RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	P4HTM	Q9NXG6	502 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	ZNF639	Q9UID6	485 aa		13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000	NUP214	P35658	2090 aa	Predicted RBP	13.57	□□□□□ -0.24
PTK2B-213	ENST00000521000		A0A087WV62	115 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	NSG1	A0A0A6YYJ2	146 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	RNF103-CHMP3	A0A140T963	221 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	CDC14C	A4D256	554 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	UPK1A	O00322	258 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	NKX2-8	O15522	239 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	BCAS2	O75934	225 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	DDAH2	O95865	285 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	KRT16	P08779	473 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	COX6A1	P12074	109 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	PTPN6	P29350	595 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	SSTR4	P31391	388 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	FUT7	Q11130	342 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	BNIP1	Q12981	228 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	TP53BP2	Q13625	1128 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	TRMT5	Q32P41	509 aa	Known RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	GTDC1	Q4AE62	458 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	FHL5	Q5TD97	284 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	TMEM64	Q6YI46	380 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	CCDC121	Q6ZUS5	278 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	C6orf120	Q7Z4R8	191 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	MRGPRE	Q86SM8	312 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR2L13	Q8N349	312 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	SIMC1	Q8NDZ2	872 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	NFAM1	Q8NET5	270 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	NUP43	Q8NFH3	380 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	B3GNT7	Q8NFL0	401 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR7G1	Q8NGA0	311 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR52R1	Q8NGF1	315 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	OR56A1	Q8NGH5	318 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	SFXN5	Q8TD22	340 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	ADAMTS17	Q8TE56	1095 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	ZNF721	Q8TF20	911 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	MOAP1	Q96BY2	351 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	LRRC58	Q96CX6	371 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	FAM120B	Q96EK7	910 aa	Known RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	FBXL20	Q96IG2	436 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	IP6K3	Q96PC2	410 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	CCNL2	Q96S94	520 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	ZNF160	Q9HCG1	818 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	SLC25A37	Q9NYZ2	338 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	VAPA	Q9P0L0	249 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	COPS7A	Q9UBW8	275 aa		13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK2B-213	ENST00000521000		A0A1W2PQ72	361 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	RRP8	O43159	456 aa	Known RBP	13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	CBX7	O95931	251 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	IFI6	P09912	130 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	WT1	P19544	449 aa	Predicted RBP	13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	EIF2S3	P41091	472 aa	Known RBP	13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	SLC26A5	P58743	744 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	GAB1	Q13480	694 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	ATP1A4	Q13733	1029 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	BTBD16	Q32M84	506 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	RUNDC3A	Q59EK9	446 aa		13.55	□□□□□ -0.24
PTK2B-213	ENST00000521000	BHLHB9	Q6PI77	547 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms