RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 A6NL46 340 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 CCT8L1PA6NM43 557 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 FXYD1O00168 92 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 OR10H2O60403 315 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 KRT34O76011 436 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 C1QCP02747 245 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 CELA2AP08217 269 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 T-ENOLP0DO92 83 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 TNNI3P19429 210 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 CPA2P48052 419 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 CCL11P51671 97 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 PLIN5Q00G26 463 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 AIMP2Q13155 320 aaKnown RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 CYLC2Q14093 348 aaPredicted RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 GTDC1Q4AE62 458 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 APLFQ8IW19 511 aaPredicted RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 MGAQ8IWI9 3026 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 MSRB3Q8IXL7 192 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 SIMC1Q8NDZ2 872 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 ADCY4Q8NFM4 1077 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 RP9Q8TA86 221 aaKnown RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 PSMA8Q8TAA3 256 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 RCN3Q96D15 328 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 ZBED6CLQ96FA7 236 aaPredicted RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 DGAT2Q96PD7 388 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 NPAS2Q99743 824 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 ARHGAP9Q9BRR9 750 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
LSM1-203ENST00000520755 CXorf36Q9H7Y0 433 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 SLAMF8Q9P0V8 285 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 MAP10Q9P2G4 905 aa14.28□□□□□ -0.12
LSM1-203ENST00000520755 TRBV5-3A0A0A0MS03 114 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 SYNDIG1LA6NDD5 238 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 SAGE2PA6NJ88 616 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 BBIP1A8MTZ0 92 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 C17orf105B2RV13 164 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 HRKO00198 91 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 CLPSP04118 112 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 DDX5P17844 614 aaKnown RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 ITGA3P26006 1051 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 POLE2P56282 527 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 SLC26A5P58743 744 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 MRPS35P82673 323 aaKnown RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 RHDQ02161 417 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 Q0VFX4 171 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 DUSP8Q13202 625 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 RAPSNQ13702 412 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 ELAVL1Q15717 326 aaKnown RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 BTBD16Q32M84 506 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 COQ5Q5HYK3 327 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 FHL5Q5TD97 284 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 ANXA8L1Q5VT79 327 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 FAM111BQ6SJ93 734 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 DLEU7Q6UYE1 221 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 KBTBD2Q8IY47 623 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 SAMD14Q8IZD0 417 aaPredicted RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 DPP10Q8N608 796 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 NATD1Q8N6N6 113 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 OR7G2Q8NG99 324 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 GOT1L1Q8NHS2 421 aaPredicted RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 FBXO27Q8NI29 283 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 ZNF675Q8TD23 568 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 PTPMT1Q8WUK0 201 aaPredicted RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 OR5P2Q8WZ92 322 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 KAT2AQ92830 837 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 RBM18Q96H35 190 aaKnown RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 IMMP1LQ96LU5 166 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 ANKRA2Q9H9E1 313 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 CXorf21Q9HAI6 301 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 TAGLN3Q9UI15 199 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 LEF1Q9UJU2 399 aaPredicted RBP14.27□□□□□ -0.13
LSM1-203ENST00000520755 LHX6Q9UPM6 363 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 CLCA3PQ9Y6N3 262 aa14.27□□□□□ -0.13
LSM1-203ENST00000520755 TNRC6AQ8NDV7 1962 aaKnown RBP14.26□□□□□ -0.13
LSM1-203ENST00000520755 MRASO14807 208 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 ANGPT2O15123 496 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 DDAH2O95865 285 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 ABCB1P08183 1280 aaPredicted RBP14.26□□□□□ -0.13
LSM1-203ENST00000520755 NT5EP21589 574 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 MC3RP41968 323 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 PGDP52209 483 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 MANFP55145 182 aaKnown RBP14.26□□□□□ -0.13
LSM1-203ENST00000520755 BIKQ13323 160 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 EXT1Q16394 746 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 MAPKAPK3Q16644 382 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 LINC00303Q3SY05 128 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 LRIF1Q5T3J3 769 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 IRAK1BP1Q5VVH5 260 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 TMEM107Q6UX40 140 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 CLEC4FQ8N1N0 589 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 GALNT16Q8N428 558 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 C7orf57Q8NEG2 295 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 OR4A15Q8NGL6 344 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 ZFP28Q8NHY6 868 aa14.26□□□□□ -0.13
LSM1-203ENST00000520755 TTC9Q92623 222 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms