RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 REP15Q6BDI9 236 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 TMEM64Q6YI46 380 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 B3GNT7Q8NFL0 401 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 OR7G2Q8NG99 324 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 DOK4Q8TEW6 326 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 THAP4Q8WY91 577 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 CNPPD1Q9BV87 410 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 C3orf14Q9HBI5 128 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 ARL8BQ9NVJ2 186 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 NTMQ9P121 344 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 TAGLN3Q9UI15 199 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 VPS4AQ9UN37 437 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 ERVK-19Q9WJR5 959 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 TMEM8BA6NDV4 472 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 UPK1AO00322 258 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 MRASO14807 208 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 EMC8O43402 210 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 ERN1O75460 977 aaKnown RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 KCNH1O95259 989 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 CBX7O95931 251 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 IGKV3-11P04433 115 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 UQCRC2P22695 453 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 CDKN2CP42773 168 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 CCT3P49368 545 aaKnown RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 GPR143P51810 404 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 GABPB1Q06547 395 aaPredicted RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 BROXQ5VW32 411 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 LRRC69Q6ZNQ3 347 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 ZNF621Q6ZSS3 439 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 PROSER1Q86XN7 944 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 OR2L13Q8N349 312 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 TRIML2Q8N7C3 387 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 ZSCAN1Q8NBB4 408 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 PCYOX1LQ8NBM8 494 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 OR7G1Q8NGA0 311 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 OR1N1Q8NGS0 311 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 M1APQ8TC57 530 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 SFXN5Q8TD22 340 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 MOAP1Q96BY2 351 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 PHF12Q96QT6 1004 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 NPAS2Q99743 824 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 OR8D2Q9GZM6 311 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 PAIP1Q9H074 479 aaKnown RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 DDX18Q9NVP1 670 aaKnown RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 MAP10Q9P2G4 905 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 FBXL4Q9UKA2 621 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 C19orf53Q9UNZ5 99 aaPredicted RBP16.58■□□□□ 0.24
SDC2-205ENST00000520233 RAXQ9Y2V3 346 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 SNX8Q9Y5X2 465 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 SPTBN2O15020 2390 aa16.58■□□□□ 0.24
SDC2-205ENST00000520233 AHCTF1Q8WYP5 2266 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 CROCCQ5TZA2 2017 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 HRKO00198 91 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ANP32DO95626 131 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 NPPAP01160 153 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 CLPSP04118 112 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ICAM2P13598 275 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 HOXB9P17482 250 aaPredicted RBP16.57■□□□□ 0.24
SDC2-205ENST00000520233 PTPN6P29350 595 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 SSTR4P31391 388 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 SOAT1P35610 550 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 PRR5P85299 388 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 CDC20Q12834 499 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 NFYCQ13952 458 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 BTBD16Q32M84 506 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 SPDYE7PQ495Y7 208 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ATP1A1-AS1Q5TC04 95 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 PLAG1Q6DJT9 500 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 CCDC81Q6ZN84 652 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 APCDD1LQ8NCL9 501 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ZCCHC14Q8WYQ9 949 aaKnown RBP16.57■□□□□ 0.24
SDC2-205ENST00000520233 NCLNQ969V3 563 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 RCN3Q96D15 328 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 FAM120BQ96EK7 910 aaKnown RBP16.57■□□□□ 0.24
SDC2-205ENST00000520233 VMP1Q96GC9 406 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 NSL1Q96IY1 281 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 FER1L6-AS2Q96M78 137 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 NUDT9Q9BW91 350 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 SEMA4CQ9C0C4 833 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 OR10A5Q9H207 317 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 EFCAB1Q9HAE3 211 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ZNF160Q9HCG1 818 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 ZCCHC3Q9NUD5 404 aaKnown RBP16.57■□□□□ 0.24
SDC2-205ENST00000520233 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.57■□□□□ 0.241e-9■□□□□ 10.7
SDC2-205ENST00000520233 COPS7AQ9UBW8 275 aa16.57■□□□□ 0.24
SDC2-205ENST00000520233 PRAMEF2O60811 474 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 COQ9O75208 318 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 PSMG1O95456 288 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 GSNP06396 782 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 PRKAR1AP10644 381 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 SLC37A1P57057 533 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 TLE3Q04726 772 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 GAB1Q13480 694 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 EXOSC7Q15024 291 aaKnown RBP16.56■□□□□ 0.24
SDC2-205ENST00000520233 BHLHB9Q6PI77 547 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 C6orf89Q6UWU4 347 aa16.56■□□□□ 0.24
SDC2-205ENST00000520233 DLEU7Q6UYE1 221 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms