RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LGMNQ99538 433 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 TXN2Q99757 166 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 PARLQ9H300 379 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 RPAP3Q9H6T3 665 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 Q9HAA7 133 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 IL1RAPQ9NPH3 570 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 BARHL2Q9NY43 387 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 GAB2Q9UQC2 676 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 CHMP2BQ9UQN3 213 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 AFF2P51816 1311 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 SYNJ2O15056 1496 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 A0A0A6YYD4 124 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 EDIL3O43854 480 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 SLC35G4P0C7Q5 338 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 KRT13P13646 458 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ECSCRQ19T08 205 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZFP69Q49AA0 526 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 NIPAL3Q6P499 406 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ARMCX2Q7L311 632 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 CARM1Q86X55 608 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 CNPY4Q8N129 248 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF614Q8N883 585 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 RELL2Q8NC24 303 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR52B6Q8NGF0 335 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR4F5Q8NH21 305 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 FBXO30Q8TB52 745 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 HCAR2Q8TDS4 363 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ANKRD27Q96NW4 1050 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 CRACR2AQ9BSW2 395 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 NT5C3AQ9H0P0 336 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 WDR76Q9H967 626 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 FARSBQ9NSD9 589 aaKnown RBP4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 AATFQ9NY61 560 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 THYN1Q9P016 225 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 CACNG5Q9UF02 275 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 CIDEBQ9UHD4 219 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 ATP6V1HQ9UI12 483 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 IKZF3Q9UKT9 509 aa4.45□□□□□ -1.7
HMGB1P46-201ENST00000520062 NPIPA5A0A0B4J1W7 369 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 NPIPA5E9PKD4 350 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 E2F3O00716 465 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 PCCBP05166 539 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 CA3P07451 260 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 FAM200BP0CF97 657 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ADORA3P0DMS8 318 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 FOSL2P15408 326 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 CYP11B1P15538 503 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ID1P41134 155 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 PGFP49763 221 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 NAPAP54920 295 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 RPS27AP62979 156 aaKnown RBP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 NFATC2Q13469 925 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ANKRD55Q3KP44 614 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 DCAF4L1Q3SXM0 396 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 MOGAT2Q3SYC2 334 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF311Q5JNZ3 666 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 SLC39A4Q6P5W5 647 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 CBWD2Q8IUF1 395 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 TBC1D21Q8IYX1 336 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 METTL4Q8N3J2 472 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ARFGAP2Q8N6H7 521 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 STKLD1Q8NE28 680 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR2T6Q8NHC8 308 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 ATXN7L3BQ96GX2 97 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 BARHL1Q9BZE3 327 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 WDR41Q9HAD4 459 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 EXTL2Q9UBQ6 330 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 PURGQ9UJV8 347 aaKnown RBP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 DUSP12Q9UNI6 340 aa4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 NIP7Q9Y221 180 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 EXOGQ9Y2C4 368 aaKnown RBP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 DDX49Q9Y6V7 483 aaKnown RBP4.44□□□□□ -1.7
HMGB1P46-201ENST00000520062 IGHV4-30-2A0A087WSY4 118 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 TRIM49BA6NDI0 452 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 FBLL1A6NHQ2 334 aaKnown RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 KRTAP29-1A8MX34 341 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 CYB561D2O14569 222 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 FRAT2O75474 233 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR4F21O95013 312 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 CFC1P0CG37 223 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 CD1DP15813 335 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 PAICSP22234 425 aaKnown RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 PTGFRP43088 359 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 IFNAR2P48551 515 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 PEX3P56589 373 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 RFTN1Q14699 578 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 FASTKD3Q14CZ7 662 aaKnown RBP4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 EMC2Q15006 297 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 POM121L1PQ3SYA9 428 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 SULT1C3Q6IMI6 304 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 LEG1Q6P5S2 330 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 ATRAIDQ6UW56 229 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 GDPGP1Q6ZNW5 385 aa4.43□□□□□ -1.7
HMGB1P46-201ENST00000520062 USP43Q70EL4 1123 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms