RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TRPC1P48995 793 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SERPINB9P50453 376 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 MGAT2Q10469 447 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 IFT88Q13099 833 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 WHAMMP3Q1A5X7 153 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 TSNAXIP1Q2TAA8 658 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 GGTA1PQ4G0N0 100 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SGO1Q5FBB7 561 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 CCNYL2Q5T2Q4 361 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 RIPPLY2Q5TAB7 128 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 FNDC7Q5VTL7 733 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 FAM219BQ5XKK7 198 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 TMEM198Q66K66 360 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 BICRALQ6AI39 1079 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SEM1Q6ZVN7 128 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 GALNT12Q8IXK2 581 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 ULK2Q8IYT8 1036 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
CSMD1-205ENST00000519623 MYRIPQ8NFW9 859 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SPPL2AQ8TCT8 520 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 DCAKDQ8WVC6 231 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 IFT81Q8WYA0 676 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 DIO2Q92813 273 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 JSRP1Q96MG2 331 aaPredicted RBP11.41□□□□□ -0.58
CSMD1-205ENST00000519623 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
CSMD1-205ENST00000519623 C1QTNF3Q9BXJ4 246 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 ANGPTL4Q9BY76 406 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 TSPYL1Q9H0U9 437 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SLC6A15Q9H2J7 730 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 KCNN3Q9UGI6 736 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 ZNF180Q9UJW8 692 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 PCDHA9Q9Y5H5 950 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
CSMD1-205ENST00000519623 EXPH5Q8NEV8 1989 aa11.41□□□□□ -0.58
CSMD1-205ENST00000519623 CAPN14A8MX76 684 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 TRIM49D1C9J1S8 452 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 TP53I11O14683 189 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 KRT38O76015 456 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 SNX4O95219 450 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 PDYNP01213 254 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 CASP3P42574 277 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 CDH13P55290 713 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 GALNT1Q10472 559 aaPredicted RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 MAP4K2Q12851 820 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 DUSP8Q13202 625 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 RPS6KA2Q15349 733 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 TBCELQ5QJ74 424 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 HLA-DQA1Q5Y7H0 255 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 TTC19Q6DKK2 380 aaPredicted RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 SLC48A1Q6P1K1 146 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 LETMD1Q6P1Q0 360 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 FAM111BQ6SJ93 734 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 PAGE2Q7Z2X7 111 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 COMMD6Q7Z4G1 85 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 CLYBLQ8N0X4 340 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 MMP21Q8N119 569 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 OR7G1Q8NGA0 311 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 ZNF483Q8TF39 744 aaPredicted RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 GNRHR2Q96P88 292 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 SECISBP2Q96T21 854 aaKnown RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 TIMP4Q99727 224 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 ZNF559Q9BR84 538 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 MRPL46Q9H2W6 279 aaKnown RBP11.4□□□□□ -0.58
CSMD1-205ENST00000519623 UBQLN3Q9H347 655 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 ZNF639Q9UID6 485 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 DTX4Q9Y2E6 619 aa11.4□□□□□ -0.58
CSMD1-205ENST00000519623 MTORP42345 2549 aa11.4□□□□□ -0.59
CSMD1-205ENST00000519623 MED12Q93074 2177 aa11.4□□□□□ -0.59
CSMD1-205ENST00000519623 MPDZO75970 2070 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 C1orf226A1L170 272 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 A8MT66 165 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 AHRRA9YTQ3 701 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 KDM4EB2RXH2 506 aaPredicted RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 POC1B-GALNT4F8VUJ3 575 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 SYT5O00445 386 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 EPPINO95925 133 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 OTCP00480 354 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 HPNP05981 417 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 ABCB1P08183 1280 aaPredicted RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 TSPAN8P19075 237 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 NT5EP21589 574 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 GPX3P22352 226 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 CNTFP26441 200 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 GDF1P27539 372 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 ABCD3P28288 659 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 HSD17B3P37058 310 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 MAPK12P53778 367 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 DUSP2Q05923 314 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 CRYZQ08257 329 aaKnown RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 PRICKLE4Q2TBC4 344 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 SLC25A35Q3KQZ1 300 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 CES4AQ5XG92 561 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 PRR22Q8IZ63 422 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 SIMC1Q8NDZ2 872 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms