RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LRRC45Q96CN5 670 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 C10orf35Q96D05 121 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 BPIFA2Q96DR5 249 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 CERS2Q96G23 380 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF274Q96GC6 653 aaPredicted RBP3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZFYVE19Q96K21 471 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM84BQ96KN1 310 aaPredicted RBP3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ALS2CR12Q96Q35 445 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 S1PR3Q99500 378 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 RIT2Q99578 217 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 COPS8Q99627 209 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB11FIP5Q9BXF6 653 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ERVK-6Q9BXR3 956 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 NUSAP1Q9BXS6 441 aaKnown RBP3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 PANK2Q9BZ23 570 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 IL22Q9GZX6 179 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 LRMDAQ9H2I8 198 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF665Q9H7R5 613 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 PSTPIP2Q9H939 334 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 LYRM4Q9HD34 91 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAN2C1Q9NTJ4 1040 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 C1orf123Q9NWV4 160 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 GNG12Q9UBI6 72 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC7A8Q9UHI5 535 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ABCG2Q9UNQ0 655 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 SATB2Q9UPW6 733 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 MEMO1Q9Y316 297 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 CBY1Q9Y3M2 126 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 FKBP7Q9Y680 259 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 DUSP10Q9Y6W6 482 aa3.61□□□□□ -1.83
RNU4-60P-201ENST00000517239 ARID2Q68CP9 1835 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 FGD5Q6ZNL6 1462 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PPIAL4EA0A075B759 164 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 A0A0G2JLL6 359 aaPredicted RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 A0A1B0GUH1 482 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SH3PXD2BA1X283 911 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB19A4D1S5 217 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 LRRC30A6NM36 301 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 C15orf62A8K5M9 175 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PDZK1P1A8MUH7 402 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 P2RY10O00398 339 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 BTN3A3O00478 584 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NR5A2O00482 541 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SCAMP2O15127 329 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NOBOXO60393 691 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDUFS7O75251 213 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 STX11O75558 287 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 WISP2O76076 250 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CDK14O94921 469 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SNAI1O95863 264 aaPredicted RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PPIAL4FP0DN26 164 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 POU2F1P14859 743 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF23P17027 643 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCNOP22674 350 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPAM1P38567 509 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 MATKP42679 507 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CASP4P49662 377 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC7A2P52569 658 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PDX1P52945 283 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CLDN17P56750 224 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GHRHRQ02643 423 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRAP1Q12931 704 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GNA13Q14344 377 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GANABQ14697 944 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 OPCMLQ14982 345 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 MRPL23Q16540 153 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ODF4Q2M2E3 257 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM153CQ494X1 144 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPR33Q49SQ1 333 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC9C1Q4G0N8 1177 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 MIDNQ504T8 468 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB6CQ53S08 254 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PAPPA-AS1Q5QFB9 102 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDUFAF5Q5TEU4 345 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 WSCD1Q658N2 575 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF776Q68DI1 518 aaPredicted RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 TWF2Q6IBS0 349 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 RHBDD2Q6NTF9 364 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM71F2Q6NXP2 309 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC27A4Q6P1M0 643 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 HSDL2Q6YN16 418 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF852Q6ZMS4 543 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 DPY19L2P2Q6ZN68 376 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 Q6ZSN1 163 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 STXBP4Q6ZWJ1 553 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 COX8CQ7Z4L0 72 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 P4HA3Q7Z4N8 544 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 DHDDSQ86SQ9 333 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 TBC1D10CQ8IV04 446 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NELFCDQ8IXH7 590 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZC3H3Q8IXZ2 948 aaKnown RBP3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF34Q8IZ26 560 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 NAGSQ8N159 534 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 GABRG1Q8N1C3 465 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CLEC4FQ8N1N0 589 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 PQLC3Q8N755 202 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM86B1Q8N7N1 296 aa3.6□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCDC197Q8NCU1 140 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms