RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 GEMIN8Q9NWZ8 242 aaKnown RBP-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 SEC14L4Q9UDX3 406 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 SLC2A6Q9UGQ3 507 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 TAGLN3Q9UI15 199 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 NSG2Q9Y328 171 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 RNF115Q9Y4L5 304 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 MAP3K15Q6ZN16 1313 aa-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 SYNE1Q8NF91 8797 aaKnown RBP-0.5□□□□□ -2.49
SCARNA23-201ENST00000516060 GPR75-ASB3A0A0A6YYF3 556 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 A0A1W2PPM1 405 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TSPY2A6NKD2 308 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 COL6A6A6NMZ7 2263 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 B4GAT1O43505 415 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 NOL4O94818 638 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 MMP10P09238 476 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TSPY3P0CV98 308 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TSPY4P0CV99 314 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TSPY8P0CW00 308 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TSPY10P0CW01 314 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 IFI30P13284 250 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 PFKFB1P16118 471 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 GARSP41250 739 aaKnown RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 MTTPP55157 894 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 DHX8Q14562 1220 aaKnown RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 CRYMQ14894 314 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 NTRK2Q16620 822 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 SEL1L2Q5TEA6 688 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 ZNF57Q68EA5 555 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 NANOGP8Q6NSW7 305 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 LDHAL6AQ6ZMR3 332 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 FRA10AC1Q70Z53 315 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 OTOAQ7RTW8 1153 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 MEX3DQ86XN8 651 aaKnown RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 CACUL1Q86Y37 369 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 ANKRD18AQ8IVF6 992 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 NAV2Q8IVL1 2488 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 ZNF664Q8N3J9 261 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 GUF1Q8N442 669 aaKnown RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 LPGAT1Q92604 370 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 SLC35C1Q96A29 364 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 CCDC34Q96HJ3 373 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 MUC13Q9H3R2 512 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 DPEP2Q9H4A9 486 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 C5orf66Q9H5L9 145 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 TRIM45Q9H8W5 580 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 RETNQ9HD89 108 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 CD274Q9NZQ7 290 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 ONECUT1Q9UBC0 465 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 NCKAP1Q9Y2A7 1128 aa-0.51□□□□□ -2.49
SCARNA23-201ENST00000516060 GJE1A6NN92 205 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 A8MUA0 341 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 TRIM77I1YAP6 450 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PGRMC2O15173 223 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 ZNF254O75437 659 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 MPZL1O95297 269 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PARNO95453 639 aaKnown RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 NUDT14O95848 222 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 LYNP07948 512 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PLEKP08567 350 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 LINGO3P0C6S8 592 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 STAG3L1P0CL83 205 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PSMA4P25789 261 aaKnown RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 SLC1A3P43003 542 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 OR3A3P47888 321 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 CCR9P51686 369 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 RPL27P61353 136 aaKnown RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 KRT31Q15323 416 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 MAP9Q49MG5 647 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 LACTB2Q53H82 288 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PCOTHQ58A44 107 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 IGSF11Q5DX21 431 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 CXCL17Q6UXB2 119 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 CYP26C1Q6V0L0 522 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 MSANTD1Q6ZTZ1 278 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PRSS48Q7RTY5 328 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 CPLX4Q7Z7G2 160 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 C9orf40Q8IXQ3 194 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 WDTC1Q8N5D0 677 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 ZNF461Q8TAF7 563 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 TRAF3IP1Q8TDR0 691 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 GPR148Q8TDV2 347 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 GIMAP1Q8WWP7 306 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PNPLA2Q96AD5 504 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 RRP36Q96EU6 259 aaKnown RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PAFAH2Q99487 392 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 NPAS2Q99743 824 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 HCAR1Q9BXC0 346 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 TRIM9Q9C026 710 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 LHX5Q9H2C1 402 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 NARFLQ9H6Q4 476 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 NANSQ9NR45 359 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 GDAP2Q9NXN4 497 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 PSD3Q9NYI0 1048 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 EIF3KQ9UBQ5 218 aaKnown RBP-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 CIDEBQ9UHD4 219 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 SMC3Q9UQE7 1217 aa-0.52□□□□□ -2.49
SCARNA23-201ENST00000516060 KAT6BQ8WYB5 2073 aa-0.53□□□□□ -2.49
SCARNA23-201ENST00000516060 TRAV18A0A075B6X5 111 aa-0.53□□□□□ -2.49
SCARNA23-201ENST00000516060 LOC102723996A0A087X1L8 192 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms