RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 DSG2Q14126 1118 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ELOAQ14241 798 aaKnown RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GNA13Q14344 377 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SF3A2Q15428 464 aaKnown RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ATP6AP1Q15904 470 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NKG7Q16617 165 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF628Q5EBL2 1059 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ARHGAP40Q5TG30 622 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 HMBOX1Q6NT76 420 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FAM111BQ6SJ93 734 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 IZUMO2Q6UXV1 221 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GALNT10Q86SR1 603 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PATL1Q86TB9 770 aaKnown RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLC44A2Q8IWA5 706 aaPredicted RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ST13P4Q8IZP2 240 aaPredicted RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SHISA5Q8N114 240 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ANKFN1Q8N957 763 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ICA1LQ8NDH6 482 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RCBTB1Q8NDN9 531 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR7G2Q8NG99 324 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR5D16Q8NGK9 328 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MIPOL1Q8TD10 442 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF675Q8TD23 568 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLC38A5Q8WUX1 472 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 XAGE5Q8WWM1 108 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DNAJC9Q8WXX5 260 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LZICQ8WZA0 190 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 EME1Q96AY2 570 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 C16orf58Q96GQ5 468 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TMEM19Q96HH6 336 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TPD52L3Q96J77 140 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MS4A4EQ96PG1 132 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR6C1Q96RD1 312 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF184Q99676 751 aaPredicted RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 BDH2Q9BUT1 245 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ACTRT3Q9BYD9 372 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 VCXQ9H320 206 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZNF304Q9HCX3 659 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NTMQ9P121 344 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DHCR7Q9UBM7 475 aaKnown RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RARRES3Q9UL19 164 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 C15orf41Q9Y2V0 281 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TMEM184BQ9Y519 407 aaPredicted RBP7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MAU2Q9Y6X3 613 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SEC16AO15027 2179 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FRYLO94915 3013 aa7.16□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MYOCOSA0A1B0GUC4 107 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 A0A1B0GX78 115 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FAM149AA5PLN7 773 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 DUXAA6NLW8 204 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 M0QX08 132 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 UPK1AO00322 258 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NTN3O00634 580 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CLOCKO15516 846 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ASNA1O43681 348 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PLOD3O60568 738 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GCM2O75603 506 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CDC123O75794 336 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PGM3O95394 542 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 AGR2O95994 175 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CAPNS1P04632 268 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ATXN8OSP0DMR3 200 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 NR2F1P10589 423 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ACP1P24666 158 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CSTF2P33240 577 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CLCN2P51788 898 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CRISP3P54108 245 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PCBP3P57721 371 aaKnown RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SELENOWP63302 87 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SERTAD2Q14140 314 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ERV3-1Q14264 604 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MYBPC3Q14896 1274 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TAF11Q15544 211 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PRICKLE4Q2TBC4 344 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CRB2Q5IJ48 1285 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ATAD3BQ5T9A4 648 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 PRAMEF17Q5VTA0 474 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 C1orf189Q5VU69 101 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MFSD12Q6NUT3 480 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 CDC73Q6P1J9 531 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 MED25Q71SY5 747 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 FKBP9P1Q75LS8 142 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 BPHLQ86WA6 291 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 KRT73Q86Y46 540 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZDHHC21Q8IVQ6 265 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 SLITRK4Q8IW52 837 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 GALNT12Q8IXK2 581 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 KBTBD2Q8IY47 623 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 LGI4Q8N135 537 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR2L13Q8N349 312 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 OR10Q1Q8NGQ4 319 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ADAMTS15Q8TE58 950 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 RIT1Q92963 219 aa7.15□□□□□ -1.26
SCARNA20.1-201ENST00000516009 TAMM41Q96BW9 452 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms