RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 NEIL3Q8TAT5 605 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SCAMP4Q969E2 229 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SLC28A3Q9HAS3 691 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 CARNS1A5YM72 827 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 YY2O15391 372 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SERPIND1P05546 499 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 CRYBB2P43320 205 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 DEFB103AP81534 67 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 TAGLNQ01995 201 aaKnown RBP9.15□□□□□ -0.94
VCAN-210ENST00000513960 MEF2AQ02078 507 aaPredicted RBP9.15□□□□□ -0.94
VCAN-210ENST00000513960 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
VCAN-210ENST00000513960 SNTA1Q13424 505 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 GINS1Q14691 196 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SERPINA13PQ6UXR4 307 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 FAM92BQ6ZTR7 304 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 KIF18BQ86Y91 864 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 TMEM25Q86YD3 366 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SLC30A8Q8IWU4 369 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 TCTE3Q8IZS6 198 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 FOXJ1Q92949 421 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SLC25A46Q96AG3 418 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 C12orf66Q96MD2 445 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 P2RY13Q9BPV8 354 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 SLC46A2Q9BY10 475 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 B3GNT2Q9NY97 397 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 ZNF282Q9UDV7 671 aaPredicted RBP9.15□□□□□ -0.94
VCAN-210ENST00000513960 ZFR2Q9UPR6 939 aaKnown RBP9.15□□□□□ -0.94
VCAN-210ENST00000513960 SESN1Q9Y6P5 492 aa9.15□□□□□ -0.94
VCAN-210ENST00000513960 ABHD14A-ACY1A0A1B0GW23 586 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 SH3D21A4FU49 640 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 SLC16A5O15375 505 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 IFNA7P01567 189 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 ALPPP05187 535 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 DRD5P21918 477 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 DNASE1P24855 282 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 AP2S1P53680 142 aaPredicted RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 RPS13P62277 151 aaKnown RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 PPP3R1P63098 170 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 DOC2BQ14184 412 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 INSL4Q14641 139 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 ZNF791Q3KP31 576 aaPredicted RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 KLHL22Q53GT1 634 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 CFAP77Q6ZQR2 320 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 VN1R5Q7Z5H4 357 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 FBXL6Q8N531 539 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 L3MBTL4Q8NA19 623 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 ZBTB44Q8NCP5 570 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 TMEM159Q96B96 161 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 CDCA4Q9BXL8 241 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 RBCK1Q9BYM8 510 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 NLNQ9BYT8 704 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 CNOT2Q9NZN8 540 aaKnown RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 MRPL15Q9P015 296 aaKnown RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 H2AFY2Q9P0M6 372 aaPredicted RBP9.15□□□□□ -0.95
VCAN-210ENST00000513960 SLC13A4Q9UKG4 626 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 PPIL1Q9Y3C6 166 aa9.15□□□□□ -0.95
VCAN-210ENST00000513960 IGLV3-16A0A075B6K0 115 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 RAB36O95755 333 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 HLA-DMAP28067 261 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 HBA1P69905 142 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ADAM15Q13444 863 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 STK11Q15831 433 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 CRB2Q5IJ48 1285 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 TOR1AIP1Q5JTV8 583 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ARSKQ6UWY0 536 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SYNPOQ8N3V7 929 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 KREMEN2Q8NCW0 462 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 TM9SF4Q92544 642 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SIGLEC11Q96RL6 698 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 OR51B5Q9H339 312 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 E7EQ34 232 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SCAMP2O15127 329 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 CCL16O15467 120 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 CXCL14O95715 111 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ANXA3P12429 323 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 JUPP14923 745 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ZNF30P17039 623 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 PTX3P26022 381 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 PTPN6P29350 595 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SLC6A12P48065 614 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SOX9P48436 509 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 RPS7P62081 194 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 RHAGQ02094 409 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 COL9A2Q14055 689 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 DOC2AQ14183 400 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 GPR68Q15743 365 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 NTRK2Q16620 822 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 BRAT1Q6PJG6 821 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 Q6ZVL8 140 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 SAMD12Q8N8I0 201 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 ST8SIA2Q92186 375 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 ZNF689Q96CS4 500 aaPredicted RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 DCLRE1CQ96SD1 692 aaKnown RBP9.14□□□□□ -0.95
VCAN-210ENST00000513960 RAD9AQ99638 391 aa9.14□□□□□ -0.95
VCAN-210ENST00000513960 FNDC11Q9BVV2 318 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms