RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PGDP52209 483 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 NCBP2P52298 156 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MANFP55145 182 aaKnown RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 NME5P56597 212 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CXADRP78310 365 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 DUSP2Q05923 314 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 LRRC74AQ0VAA2 488 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MAP4K2Q12851 820 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 RCAN2Q14206 197 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MLC1Q15049 377 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 LTB4RQ15722 352 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PRSS53Q2L4Q9 553 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MPEG1Q2M385 716 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PRICKLE4Q2TBC4 344 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 DEFB109BQ30KR1 87 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 BTBD16Q32M84 506 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF750Q32MQ0 723 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PGS1Q32NB8 556 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF628Q5EBL2 1059 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 SPANXN4Q5MJ08 99 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 GKAP1Q5VSY0 366 aaPredicted RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PLAG1Q6DJT9 500 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 OR4F3Q6IEY1 312 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MSANTD1Q6ZTZ1 278 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PIGWQ7Z7B1 504 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 APLFQ8IW19 511 aaPredicted RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 APCDD1LQ8NCL9 501 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 NFAM1Q8NET5 270 aaPredicted RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 VPS37AQ8NEZ2 397 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 B3GNT7Q8NFL0 401 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 OR9I1Q8NGQ6 314 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 OR1N1Q8NGS0 311 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 M1APQ8TC57 530 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC2A12Q8TD20 617 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PTPMT1Q8WUK0 201 aaPredicted RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 RIT1Q92963 219 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CIDECQ96AQ7 238 aaPredicted RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PPWD1Q96BP3 646 aaKnown RBP7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 ERP27Q96DN0 273 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 VMP1Q96GC9 406 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 AMDHD1Q96NU7 426 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CCT8L2Q96SF2 557 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CNPPD1Q9BV87 410 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 GLIPR2Q9H4G4 154 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CXorf21Q9HAI6 301 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF160Q9HCG1 818 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MMP25Q9NPA2 562 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 SLAMF7Q9NQ25 335 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MAT2BQ9NZL9 334 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC167Q9P0B6 97 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 ERVK-19Q9WJR5 959 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 MGAQ8IWI9 3026 aa7.07□□□□□ -1.28
HMGXB3-204ENST00000513318 PCNX3Q9H6A9 2034 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PKD1L2Q7Z442 2459 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 USP24Q9UPU5 2620 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 A0A087WV62 115 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 A0A1W2PRB8 838 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 TTLL8A6PVC2 850 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 C9JVG2 144 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PLOD2O00469 737 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 NR5A2O00482 541 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC22A2O15244 555 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CFLARO15519 480 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PLOD3O60568 738 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PRAMEF2O60811 474 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC22O60826 627 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 BCAS2O75934 225 aaPredicted RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 DDAH2O95865 285 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 IL2RAP01589 272 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 IGKV3-11P04433 115 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SERPINA7P05543 415 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CT62P0C5K7 136 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 GPC1P35052 558 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ZFP36L2P47974 494 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 POLR2JP52435 117 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 WNT3P56703 355 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SOX8P57073 446 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 KCNK10P57789 538 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 MRPS35P82673 323 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 FUT7Q11130 342 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 HSPB3Q12988 150 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ST3GAL2Q16842 350 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 TIGD2Q4W5G0 525 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 AGKQ53H12 422 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ANXA8L1Q5VT79 327 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 IRAK1BP1Q5VVH5 260 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 JMJD6Q6NYC1 403 aaPredicted RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 BORAQ6PGQ7 559 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PAOXQ6QHF9 649 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 RNF111Q6ZNA4 994 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 DGAT2L6Q6ZPD8 337 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF551Q7Z340 670 aaPredicted RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 KBTBD2Q8IY47 623 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CPSF7Q8N684 471 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ADCY4Q8NFM4 1077 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR7G1Q8NGA0 311 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR9A2Q8NGT5 310 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR8K3Q8NH51 312 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PSMA8Q8TAA3 256 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms