RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SIX1Q15475 284 aaPredicted RBP2.56□□□□□ -2
CHD1-207ENST00000511628 ECSCRQ19T08 205 aa2.56□□□□□ -2
CHD1-207ENST00000511628 UNC50Q53HI1 259 aa2.56□□□□□ -2
CHD1-207ENST00000511628 TCHHL1Q5QJ38 904 aaPredicted RBP2.56□□□□□ -2
CHD1-207ENST00000511628 SLC25A30Q5SVS4 291 aa2.56□□□□□ -2
CHD1-207ENST00000511628 HIST2H2AA3Q6FI13 130 aa2.56□□□□□ -2
CHD1-207ENST00000511628 CDHR3Q6ZTQ4 885 aa2.56□□□□□ -2
CHD1-207ENST00000511628 FAM131BQ86XD5 332 aa2.56□□□□□ -2
CHD1-207ENST00000511628 CCDC71Q8IV32 467 aaPredicted RBP2.56□□□□□ -2
CHD1-207ENST00000511628 LINC00518Q8N0U6 118 aa2.56□□□□□ -2
CHD1-207ENST00000511628 Q8N377 158 aa2.56□□□□□ -2
CHD1-207ENST00000511628 RNF148Q8N7C7 305 aa2.56□□□□□ -2
CHD1-207ENST00000511628 LEMD2Q8NC56 503 aa2.56□□□□□ -2
CHD1-207ENST00000511628 OR1K1Q8NGR3 316 aa2.56□□□□□ -2
CHD1-207ENST00000511628 SPPL2AQ8TCT8 520 aa2.56□□□□□ -2
CHD1-207ENST00000511628 CHPT1Q8WUD6 406 aa2.56□□□□□ -2
CHD1-207ENST00000511628 PCNPQ8WW12 178 aaKnown RBP2.56□□□□□ -2
CHD1-207ENST00000511628 TCP11Q8WWU5 503 aa2.56□□□□□ -2
CHD1-207ENST00000511628 TBC1D31Q96DN5 1066 aa2.56□□□□□ -2
CHD1-207ENST00000511628 RAB3CQ96E17 227 aa2.56□□□□□ -2
CHD1-207ENST00000511628 FOXN4Q96NZ1 517 aa2.56□□□□□ -2
CHD1-207ENST00000511628 PSMB7Q99436 277 aa2.56□□□□□ -2
CHD1-207ENST00000511628 LGMNQ99538 433 aa2.56□□□□□ -2
CHD1-207ENST00000511628 FTHL17Q9BXU8 183 aa2.56□□□□□ -2
CHD1-207ENST00000511628 TMEM231Q9H6L2 316 aa2.56□□□□□ -2
CHD1-207ENST00000511628 NT5DC2Q9H857 520 aa2.56□□□□□ -2
CHD1-207ENST00000511628 NMUR1Q9HB89 426 aa2.56□□□□□ -2
CHD1-207ENST00000511628 STARD5Q9NSY2 213 aa2.56□□□□□ -2
CHD1-207ENST00000511628 GPR83Q9NYM4 423 aa2.56□□□□□ -2
CHD1-207ENST00000511628 VPS54Q9P1Q0 977 aa2.56□□□□□ -2
CHD1-207ENST00000511628 ISY1Q9ULR0 285 aaKnown RBP2.56□□□□□ -2
CHD1-207ENST00000511628 ENTPD4Q9Y227 616 aa2.56□□□□□ -2
CHD1-207ENST00000511628 MTF2Q9Y483 593 aaPredicted RBP2.56□□□□□ -2
CHD1-207ENST00000511628 FAM205AQ6ZU69 1335 aa2.56□□□□□ -2
CHD1-207ENST00000511628 IGLV4-3A0A075B6K6 122 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TRGV8A0A0C4DH27 118 aa2.55□□□□□ -2
CHD1-207ENST00000511628 IQCMA0A1B0GVH7 501 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TMCO5BA8MYB1 307 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TRAFD1O14545 582 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 TXNL1O43396 289 aa2.55□□□□□ -2
CHD1-207ENST00000511628 LANCL1O43813 399 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ATP8B3O60423 1300 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TSPAN2O60636 221 aa2.55□□□□□ -2
CHD1-207ENST00000511628 FRAT2O75474 233 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 SRSF10O75494 262 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 POP4O95707 220 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 SEMA4FO95754 770 aa2.55□□□□□ -2
CHD1-207ENST00000511628 IGHG1P01857 330 aa2.55□□□□□ -2
CHD1-207ENST00000511628 HIST1H2AGP0C0S8 130 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 OR9G9P0C7N8 305 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ADORA3P0DMS8 318 aa2.55□□□□□ -2
CHD1-207ENST00000511628 FOSL2P15408 326 aa2.55□□□□□ -2
CHD1-207ENST00000511628 DNAJB1P25685 340 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ALDH3B1P43353 468 aa2.55□□□□□ -2
CHD1-207ENST00000511628 GSK3BP49841 420 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ZNF131P52739 623 aa2.55□□□□□ -2
CHD1-207ENST00000511628 GMFBP60983 142 aa2.55□□□□□ -2
CHD1-207ENST00000511628 POLR2FP61218 127 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 NAAAQ02083 359 aa2.55□□□□□ -2
CHD1-207ENST00000511628 GABPB1Q06547 395 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 BTG3Q14201 252 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 SMC1AQ14683 1233 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 RFTN1Q14699 578 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 CCL14Q16627 93 aa2.55□□□□□ -2
CHD1-207ENST00000511628 HKDC1Q2TB90 917 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ZNF699Q32M78 642 aa2.55□□□□□ -2
CHD1-207ENST00000511628 POM121L1PQ3SYA9 428 aa2.55□□□□□ -2
CHD1-207ENST00000511628 DNAJC21Q5F1R6 531 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 C12orf60Q5U649 245 aa2.55□□□□□ -2
CHD1-207ENST00000511628 RAET1GQ6H3X3 334 aa2.55□□□□□ -2
CHD1-207ENST00000511628 FAM159AQ6UWV7 190 aa2.55□□□□□ -2
CHD1-207ENST00000511628 UNC5DQ6UXZ4 953 aa2.55□□□□□ -2
CHD1-207ENST00000511628 RBM43Q6ZSC3 357 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 CATSPER4Q7RTX7 472 aa2.55□□□□□ -2
CHD1-207ENST00000511628 NUFIP2Q7Z417 695 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 GPR142Q7Z601 462 aa2.55□□□□□ -2
CHD1-207ENST00000511628 SYVN1Q86TM6 617 aa2.55□□□□□ -2
CHD1-207ENST00000511628 RPAINQ86UA6 219 aa2.55□□□□□ -2
CHD1-207ENST00000511628 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 POM121L12Q8N7R1 296 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ZNF491Q8N8L2 437 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ZNF397Q8NF99 534 aaPredicted RBP2.55□□□□□ -2
CHD1-207ENST00000511628 RDH11Q8TC12 318 aa2.55□□□□□ -2
CHD1-207ENST00000511628 NPRL2Q8WTW4 380 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TMEM37Q8WXS4 190 aa2.55□□□□□ -2
CHD1-207ENST00000511628 RSPH1Q8WYR4 309 aa2.55□□□□□ -2
CHD1-207ENST00000511628 HIST1H2ACQ93077 130 aa2.55□□□□□ -2
CHD1-207ENST00000511628 TOMM40LQ969M1 308 aa2.55□□□□□ -2
CHD1-207ENST00000511628 MCHR2Q969V1 340 aa2.55□□□□□ -2
CHD1-207ENST00000511628 KCNK16Q96T55 309 aa2.55□□□□□ -2
CHD1-207ENST00000511628 CCSER1Q9C0I3 900 aa2.55□□□□□ -2
CHD1-207ENST00000511628 LIN28AQ9H9Z2 209 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 TAS2R16Q9NYV7 291 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ERVK-18Q9QC07 812 aa2.55□□□□□ -2
CHD1-207ENST00000511628 HOOK1Q9UJC3 728 aaKnown RBP2.55□□□□□ -2
CHD1-207ENST00000511628 FBXO7Q9Y3I1 522 aa2.55□□□□□ -2
CHD1-207ENST00000511628 ZNF175Q9Y473 711 aa2.55□□□□□ -2
CHD1-207ENST00000511628 RNF115Q9Y4L5 304 aa2.55□□□□□ -2
CHD1-207ENST00000511628 H3BMH7 237 aa2.54□□□□□ -2
CHD1-207ENST00000511628 K7EPI3 171 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms