RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 BEX2Q9BXY8 128 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ULBP1Q9BZM6 244 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 VCXQ9H320 206 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 RNPEPL1Q9HAU8 725 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 Q9N2J8 555 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SIX2Q9NPC8 291 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 TMEM248Q9NWD8 314 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 GRHL1Q9NZI5 618 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ADAM22Q9P0K1 906 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 LGALS13Q9UHV8 139 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 VPS28Q9UK41 221 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 LRRC42Q9Y546 428 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 TENM2Q9NT68 2774 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 MPDZO75970 2070 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 A0A087WV62 115 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 TRAV17A0A0B4J275 112 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 TMEM120BA0PK00 339 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 TRAFD1O14545 582 aaPredicted RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 NDC80O14777 642 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
GYPB-212ENST00000511198 ABHD2P08910 425 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 LINGO3P0C6S8 592 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 KRT13P13646 458 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ABOP16442 354 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 HOXB9P17482 250 aaPredicted RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 GAP43P17677 238 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CHRNB2P17787 502 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 GNAZP19086 355 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CALB2P22676 271 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ALDH3A1P30838 453 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 TRIM23P36406 574 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 HADHAP40939 763 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ACTR1BP42025 376 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 GNPDA1P46926 289 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 TKTL1P51854 596 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 SLC18A1P54219 525 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 PLTPP55058 493 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 ACTR1AP61163 376 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CRYZQ08257 329 aaKnown RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 DYNC1I2Q13409 638 aaKnown RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 KNOP1Q1ED39 458 aaKnown RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 TMEM52BQ4KMG9 183 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 KRTCAP3Q53RY4 240 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ZNF805Q5CZA5 627 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CARD16Q5EG05 197 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ATPAF1Q5TC12 328 aaPredicted RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 LIPNQ5VXI9 398 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 KIAA0930Q6ICG6 404 aaPredicted RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 IRGCQ6NXR0 463 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 PRSS42Q7Z5A4 293 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 PIGZQ86VD9 579 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 GPBP1Q86WP2 473 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 FAM185AQ8N0U4 392 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CADM3Q8N126 398 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 BBOF1Q8ND07 529 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 OR6K2Q8NGY2 324 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 FBXO25Q8TCJ0 367 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 SLC2A12Q8TD20 617 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 FAM222BQ8WU58 562 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 ARHGEF2Q92974 986 aaKnown RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 TSC22D3Q99576 134 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 MAP3K3Q99759 626 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 CBWD1Q9BRT8 395 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 PPCSQ9HAB8 311 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 FGFR1OP2Q9NVK5 253 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 NKIRAS1Q9NYS0 192 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 SENP1Q9P0U3 644 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 WBP11Q9Y2W2 641 aaKnown RBP4.97□□□□□ -1.61
GYPB-212ENST00000511198 USH1CQ9Y6N9 552 aa4.97□□□□□ -1.61
GYPB-212ENST00000511198 SPTBP11277 2137 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 IGHV5-51A0A0C4DH38 117 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 NPIPA5E9PKD4 350 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 PEX11AO75192 247 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 CDH16O75309 829 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 TSPAN12O95859 305 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 MOCS2O96007 188 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 LDHAP00338 332 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 STATHP02808 62 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 NR3C1P04150 777 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 UMODP07911 640 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 STX2P32856 288 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 COILP38432 576 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 PEX19P40855 299 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 RPL21P46778 160 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 COMPP49747 757 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 PAPOLAP51003 745 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 ARSEP51690 589 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 RPS6KA3P51812 740 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 ARG2P78540 354 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 IFI35P80217 286 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 CACNG1Q06432 222 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 KLC1Q07866 573 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 PTK6Q13882 451 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 GSTA3Q16772 222 aa4.96□□□□□ -1.62
GYPB-212ENST00000511198 OTUD1Q5VV17 481 aaPredicted RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 CCDC137Q6PK04 289 aaKnown RBP4.96□□□□□ -1.62
GYPB-212ENST00000511198 FAM92BQ6ZTR7 304 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms