RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 WRAP53Q9BUR4 548 aaKnown RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 BTBD1Q9H0C5 482 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 ATG10Q9H0Y0 220 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 ABCG8Q9H221 673 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 MMP28Q9H239 520 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 KCNN2Q9H2S1 579 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 PIGUQ9H490 435 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SUV39H2Q9H5I1 410 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 IGFLR1Q9H665 355 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 EMC7Q9NPA0 242 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 KRCC1Q9NPI7 259 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SEMA3GQ9NS98 782 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM184CQ9NVA4 438 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 ASB6Q9NWX5 421 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAS2R16Q9NYV7 291 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 DNAJC27Q9NZQ0 273 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 EMC3Q9P0I2 261 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 COPZ2Q9P299 210 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 STOX2Q9P2F5 926 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 REV1Q9UBZ9 1251 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLEKHB1Q9UF11 243 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRKAG2Q9UGJ0 569 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC25A13Q9UJS0 675 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 MAFFQ9ULX9 164 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 POLHQ9Y253 713 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMA7Q9Y2S6 64 aaKnown RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SNX11Q9Y5W9 270 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SPIN1Q9Y657 262 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 ALG5Q9Y673 324 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 SCN8AQ9UQD0 1980 aa4.71□□□□□ -1.66
HMGB3P16-201ENST00000508037 A0A1B0GVI7 797 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 LINC00854A0A1B0GVQ3 168 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 LINC00862A6NCI5 91 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TUBAL3A6NHL2 446 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 A6NL46 340 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARHGEF33A8MVX0 844 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 INMT-MINDY4F8WBC2 141 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 J3KTA2 159 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MSTNO14793 375 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CASKO14936 926 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 YY2O15391 372 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLA2G10O15496 165 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TLX2O43763 284 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC28A2O43868 658 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 B4GALT3O60512 393 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF4O60810 478 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 EFCAB14O75071 495 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 IFNA7P01567 189 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ASGR1P07306 291 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 HBQ1P09105 142 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 C1GALT1C1LP0DN25 315 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARSBP15848 533 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 HMGA1P17096 107 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF8P17098 575 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 HK1P19367 917 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD53P19397 219 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD22P20273 847 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TNFRSF1BP20333 461 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 LHCGRP22888 699 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ELAVL4P26378 380 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 STOMP27105 288 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 COL8A1P27658 744 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 VIPR1P32241 457 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KIR2DL3P43628 341 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 RECQLP46063 649 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KCNJ5P48544 419 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC11A1P49279 550 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 EVX1P49640 407 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CRISP3P54108 245 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 EPHB3P54753 998 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAS2R50P59544 299 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAB14P61106 215 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 BDH1Q02338 343 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 MXD1Q05195 221 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACSM1Q08AH1 577 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLBPQ14493 270 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 GINS1Q14691 196 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PTPRRQ15256 657 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRAM1Q15629 374 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 KCNA10Q16322 511 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SNAPC1Q16533 368 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC5A12Q1EHB4 618 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF284Q2VY69 593 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 SYT14P1Q58G82 188 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZMAT1Q5H9K5 638 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 WDR45BQ5MNZ6 344 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ENTPD8Q5MY95 495 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 ATAT1Q5SQI0 421 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF8Q5VWM4 474 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF9Q5VWM5 478 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAMEF7Q5VXH5 474 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CDC73Q6P1J9 531 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 PGBD2Q6P3X8 592 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 C22orf39Q6P5X5 142 aa4.7□□□□□ -1.66
HMGB3P16-201ENST00000508037 CNIH2Q6PI25 160 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms