RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TMEM26Q6ZUK4 368 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 ASRGL1Q7L266 308 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 TIPARPQ7Z3E1 657 aaKnown RBP2.76□□□□□ -1.97
LSM6-205ENST00000507449 SLC47A2Q86VL8 602 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 C4orf32Q8N8J7 132 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 MINDY2Q8NBR6 621 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 LEMD2Q8NC56 503 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 CNNM3Q8NE01 707 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 ZNF397Q8NF99 534 aaPredicted RBP2.76□□□□□ -1.97
LSM6-205ENST00000507449 FLVCR1-AS1Q8TAF5 88 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 TMEM37Q8WXS4 190 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 PHYHIPQ92561 330 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 RAB3CQ96E17 227 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 HSD17B14Q9BPX1 270 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 ADNPQ9H2P0 1102 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 JPT2Q9H910 190 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 IL1RL2Q9HB29 575 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 NRN1Q9NPD7 142 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.76□□□□□ -1.97
LSM6-205ENST00000507449 ERVK-18Q9QC07 812 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 RARRES3Q9UL19 164 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 ZNF175Q9Y473 711 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 VENTXO95231 258 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 RENP00797 406 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 HOXD4P09016 255 aaPredicted RBP2.75□□□□□ -1.97
LSM6-205ENST00000507449 MAPK3P27361 379 aaPredicted RBP2.75□□□□□ -1.97
LSM6-205ENST00000507449 PPP2R1AP30153 589 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CDKL1Q00532 357 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 NAAAQ02083 359 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 ACY1Q03154 408 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 EMC2Q15006 297 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CEBPEQ15744 281 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CARTPTQ16568 116 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 HAGHQ16775 308 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 TOR1AIP1Q5JTV8 583 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 ADAMTSL5Q6ZMM2 481 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CATSPER3Q86XQ3 398 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 RNF148Q8N7C7 305 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 COLGALT1Q8NBJ5 622 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 ZNF485Q8NCK3 441 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 ICA1LQ8NDH6 482 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 OR56B1Q8NGI3 324 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 OR4Q3Q8NH05 313 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 FBXO25Q8TCJ0 367 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CCDC51Q96ER9 411 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 WBP1Q96G27 269 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 ANKRD27Q96NW4 1050 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 SOSTQ9BQB4 213 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 KRT23Q9C075 422 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 DCTPP1Q9H773 170 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 HEXA-AS1Q9H8Q6 139 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 HOMER3Q9NSC5 361 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 TAS2R16Q9NYV7 291 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 GTSE1Q9NYZ3 720 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 TUBGCP4Q9UGJ1 667 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 PLA2G4CQ9UP65 541 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 MOB4Q9Y3A3 225 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 STYXL1Q9Y6J8 313 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 CLCA3PQ9Y6N3 262 aa2.75□□□□□ -1.97
LSM6-205ENST00000507449 AFF2P51816 1311 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 BICDL2A1A5D9 508 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 BCLAF3A2AJT9 711 aaKnown RBP2.74□□□□□ -1.97
LSM6-205ENST00000507449 STK17BO94768 372 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 IGHV3-13P01766 116 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 SERPINB2P05120 415 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 MELTFP08582 738 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 CAPN2P17655 700 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 IL4RP24394 825 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 UCP1P25874 307 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 PRDX2P32119 198 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 CSRP3P50461 194 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 SGSHP51688 502 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 RIDAP52758 137 aaKnown RBP2.74□□□□□ -1.97
LSM6-205ENST00000507449 SLC26A5P58743 744 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 MYBPC1Q00872 1141 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 FCHO2Q0JRZ9 810 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 SPP2Q13103 211 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 RAPSNQ13702 412 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 CYLC2Q14093 348 aaPredicted RBP2.74□□□□□ -1.97
LSM6-205ENST00000507449 PDIA5Q14554 519 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 C17orf58Q2M2W7 97 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 LRIT3Q3SXY7 679 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 FAM182AQ5T1J6 154 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 LEMD1Q68G75 181 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 EMBQ6PCB8 327 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 ZNF841Q6ZN19 808 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 SAMD12Q8N8I0 201 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 SUMF1Q8NBK3 374 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 BIRC7Q96CA5 298 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 CPXM1Q96SM3 734 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 NDUFAF3Q9BU61 184 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 LRRCC1Q9C099 1032 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 PANK3Q9H999 370 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 ADGRL4Q9HBW9 690 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 EIF3KQ9UBQ5 218 aaKnown RBP2.74□□□□□ -1.97
LSM6-205ENST00000507449 RNF115Q9Y4L5 304 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 AUP1Q9Y679 476 aa2.74□□□□□ -1.97
LSM6-205ENST00000507449 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 PCNX3Q9H6A9 2034 aa2.73□□□□□ -1.97
LSM6-205ENST00000507449 ACOD1A6NK06 481 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms