RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 WT1P19544 449 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 OTX2P32243 289 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 SOAT1P35610 550 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 PGDP52209 483 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 DUSP8Q13202 625 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 CAPRIN1Q14444 709 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 ZNF267Q14586 743 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 EXOSC7Q15024 291 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 PAPD4Q6PIY7 484 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 RINLQ6ZS11 566 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ZNF621Q6ZSS3 439 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 VWA5B2Q8N398 1253 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ZNF321PQ8N8H1 164 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 PCYOX1LQ8NBM8 494 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 C7orf57Q8NEG2 295 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 NFAM1Q8NET5 270 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 SNIP1Q8TAD8 396 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 KIAA1143Q96AT1 154 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 FAM120BQ96EK7 910 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 MAGED4Q96JG8 741 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 CGREF1Q99674 301 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 SLC35A5Q9BS91 424 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 TRIM8Q9BZR9 551 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 EFCAB1Q9HAE3 211 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 WDR70Q9NW82 654 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 C19orf25Q9UFG5 118 aaPredicted RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 VPS4AQ9UN37 437 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ERVK-19Q9WJR5 959 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 SNX8Q9Y5X2 465 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 A0A087WV62 115 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 IGHV1-45A0A0A0MS14 117 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 RNF103-CHMP3A0A140T963 221 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 PLOD3O60568 738 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 ANP32DO95626 131 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 CAPNS1P04632 268 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 UQCRC2P22695 453 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 SSTR4P31391 388 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 CCT3P49368 545 aaKnown RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 FUT7Q11130 342 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 SELPLGQ14242 412 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 C8orf82Q6P1X6 216 aaPredicted RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 HACD2Q6Y1H2 254 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 OR2L13Q8N349 312 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 OR11G2Q8NGC1 345 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 OR14A16Q8NHC5 309 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 SLC2A12Q8TD20 617 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 SFXN5Q8TD22 340 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 ZFP90Q8TF47 636 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 KCNE4Q8WWG9 221 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 LRRC58Q96CX6 371 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 TUBB6Q9BUF5 446 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 CNPPD1Q9BV87 410 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 ZNF700Q9H0M5 742 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 EPS8L2Q9H6S3 715 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 NTMQ9P121 344 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
RNF4-208ENST00000507247 CLCA3PQ9Y6N3 262 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
RNF4-208ENST00000507247 CACNA1BQ00975 2339 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 AKAP13Q12802 2813 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 B2RBV5 119 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 MASP2O00187 686 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 PCDH17O14917 1159 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 EMC8O43402 210 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SLITRK5O94991 958 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 UNC5CO95185 931 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 PSMG1O95456 288 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 IGKV3-11P04433 115 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 IFI6P09912 130 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 CPOXP36551 454 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 GPR143P51810 404 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SLC25A3Q00325 362 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 ART3Q13508 389 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 RUNDC3AQ59EK9 446 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 C6orf163Q5TEZ5 329 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SAXO2Q658L1 398 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 MRGPREQ86SM8 312 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 RAB43Q86YS6 212 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms