RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RNASET2O00584 256 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 PRKNO60260 465 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SNX3O60493 162 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 CBX7O95931 251 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 IL6P05231 212 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 NCF2P19878 526 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SSTR4P31391 388 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SOX11P35716 441 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 KIR3DL1P43629 444 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 MANFP55145 182 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 POLE2P56282 527 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 STX1BP61266 288 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 MRPS35P82673 323 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 DUSP8Q13202 625 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SQLEQ14534 574 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 FAM174BQ3ZCQ3 159 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 PIGWQ7Z7B1 504 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 CPLX4Q7Z7G2 160 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 FUNDC1Q8IVP5 155 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 OR7G2Q8NG99 324 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 OR9I1Q8NGQ6 314 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 ZFP28Q8NHY6 868 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 BRIX1Q8TDN6 353 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 OR5P2Q8WZ92 322 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 KAT2AQ92830 837 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 ELP4Q96EB1 424 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 ZBTB18Q99592 522 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 CNPPD1Q9BV87 410 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 NSRP1Q9H0G5 558 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 OR10A5Q9H207 317 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SLC52A3Q9NQ40 469 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 SIRT3Q9NTG7 399 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 NTMQ9P121 344 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 COPS7AQ9UBW8 275 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 ERVK-11Q9UQG0 969 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 PCDHGA9Q9Y5G4 932 aaKnown RBP11.94□□□□□ -0.5
TCOF1-210ENST00000506767 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 TRBV11-1A0A0K0K1C0 115 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 PRSS51A0A1B0GVH4 220 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 FAM234BA2RU67 622 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 A6NL46 340 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 C9JVG2 144 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 BCAS2O75934 225 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 ZFAND5O76080 213 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 PSMG1O95456 288 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 PGRP06401 933 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 EFNA1P20827 205 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 S100A3P33764 101 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 POLR2JP52435 117 aaKnown RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 DGKQP52824 942 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 RNF4P78317 190 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 HSPB3Q12988 150 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 CRB2Q5IJ48 1285 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 ANXA8L1Q5VT79 327 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 BLOC1S3Q6QNY0 202 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 HSDL2Q6YN16 418 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 RNF111Q6ZNA4 994 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 C9orf40Q8IXQ3 194 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 OR2L13Q8N349 312 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 SMAD5Q99717 465 aaKnown RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 NPAS2Q99743 824 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 DEFB126Q9BYW3 111 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 TRIM4Q9C037 500 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 FAM107BQ9H098 131 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 RABEP2Q9H5N1 569 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 FAM120CQ9NX05 1096 aaKnown RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 PTGFRNQ9P2B2 879 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 BTNL2Q9UIR0 455 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 C19orf53Q9UNZ5 99 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-210ENST00000506767 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 ATRXP46100 2492 aa11.93□□□□□ -0.5
TCOF1-210ENST00000506767 ERVH48-1M5A8F1 160 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 UPK1AO00322 258 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 C6orf47O95873 294 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 CD1EP15812 388 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 MC3RP41968 323 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 EMDP50402 254 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 CDK9P50750 372 aaKnown RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 HBA1P69905 142 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 RCAN2Q14206 197 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 EXOSC7Q15024 291 aaKnown RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 EBPQ15125 230 aaKnown RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 AGAP7PQ5VUJ5 663 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 IRAK1BP1Q5VVH5 260 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 B3GNTL1Q67FW5 361 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 IGFL2Q6UWQ7 119 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 TMEM107Q6UX40 140 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 RPS19BP1Q86WX3 136 aaKnown RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 CLECL1Q8IZS7 167 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 LGI4Q8N135 537 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 SIRT6Q8N6T7 355 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 ZNF441Q8N8Z8 693 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms