RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LAS2Q8IYD9 372 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 GPR135Q8IZ08 494 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF366Q8N895 744 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF527Q8NB42 609 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 OR5D16Q8NGK9 328 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CSGALNACT1Q8TDX6 532 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DOK4Q8TEW6 326 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DNAJA4Q8WW22 397 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ASB12Q8WXK4 309 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PEX13Q92968 403 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MARC2Q969Z3 335 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 METTL17Q9H7H0 456 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 NDUFB11Q9NX14 153 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 B3GNT2Q9NY97 397 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CPNE7Q9UBL6 633 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 FTSJ1Q9UET6 329 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RPL36Q9Y3U8 105 aaKnown RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GAPDHSO14556 408 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SYN3O14994 580 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SHOXO15266 292 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MAGEB4O15481 346 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 C1SP09871 688 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 TFPIP10646 304 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PTHLHP12272 177 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 HOXB9P17482 250 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IDSP22304 550 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 KELP23276 732 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ACRV1P26436 265 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 HMGCLP35914 325 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MVDP53602 400 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MELKQ14680 651 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PRSS53Q2L4Q9 553 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SFRP5Q5T4F7 317 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 FUT10Q6P4F1 479 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 LYPD4Q6UWN0 246 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 APCDD1Q8J025 514 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 OR4D11Q8NGI4 311 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC7A13Q8TCU3 470 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PXYLP1Q8TE99 480 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 BTN2A2Q8WVV5 523 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ST8SIA4Q92187 359 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ORAI1Q96D31 301 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 NARS2Q96I59 477 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 RADILQ96JH8 1075 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CXorf58Q96LI9 332 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 COQ10AQ96MF6 247 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PKMYT1Q99640 499 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GPA33Q99795 319 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 THAP7Q9BT49 309 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GTPBP2Q9BX10 602 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 NLNQ9BYT8 704 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PLA2G12AQ9BZM1 189 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 NIPAL2Q9H841 368 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IMP3Q9NV31 184 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PCDHB1Q9Y5F3 818 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MYO9BQ13459 2157 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GREB1Q4ZG55 1949 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 NPIPB15A6NHN6 443 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GLOD5A6NK44 160 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 INPPL1O15357 1258 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PQBP1O60828 265 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SIX6O95475 246 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC2A10O95528 541 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 APOC3P02656 99 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 RAF1P04049 648 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ALDOBP05062 364 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ATF6P18850 670 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 STOMP27105 288 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC11A1P49279 550 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CLDN20P56880 219 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ERVFC1P60507 584 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 TSPAN5P62079 268 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC3A1Q07837 685 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 VEZF1Q14119 521 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MFSD13AQ14CX5 517 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MORN1Q5T089 497 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC30A6Q6NXT4 461 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 KIF18BQ86Y91 864 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 STPG2Q8N412 459 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 GEMIN6Q8WXD5 167 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 UFD1Q92890 307 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 UCN3Q969E3 161 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 PPCDCQ96CD2 204 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 FCRL4Q96PJ5 515 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ORAI3Q9BRQ5 295 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM43Q9BTV4 400 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MAGEH1Q9H213 219 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 MIEF1Q9NQG6 463 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 SLC35C2Q9NQQ7 365 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 FAM120CQ9NX05 1096 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 WSB2Q9NYS7 404 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CFAP97Q9P2B7 532 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 NUP50Q9UKX7 468 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 LSM2Q9Y333 95 aaKnown RBP7.22□□□□□ -1.25
NEDD9-208ENST00000504387 CSNK1G3Q9Y6M4 447 aa7.22□□□□□ -1.25
NEDD9-208ENST00000504387 ENPP4Q9Y6X5 453 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms