RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZIK1Q3SY52 487 aaPredicted RBP20.66■□□□□ 0.9
PTPN13-205ENST00000502971 TCTE1Q5JU00 501 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 KRT73Q86Y46 540 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 SLC35F3Q8IY50 421 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 TTC29Q8NA56 475 aaPredicted RBP20.66■□□□□ 0.9
PTPN13-205ENST00000502971 ZNF555Q8NEP9 628 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 OR9A4Q8NGU2 314 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 COL26A1Q96A83 441 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 FBXL20Q96IG2 436 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 MS4A4EQ96PG1 132 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 SPATA5L1Q9BVQ7 753 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 ACTRT3Q9BYD9 372 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 TOR3AQ9H497 397 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 DDX18Q9NVP1 670 aaKnown RBP20.66■□□□□ 0.9
PTPN13-205ENST00000502971 GPC6Q9Y625 555 aaPredicted RBP20.66■□□□□ 0.9
PTPN13-205ENST00000502971 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 IGHV1OR21-1A0A087WYE8 117 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 IGHV5-51A0A0C4DH38 117 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 RDH16O75452 317 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 DNAJB5O75953 348 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 H6PDO95479 791 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 ATP1B1P05026 303 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 RRM2P31350 389 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 OR1E2P47887 323 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 OR1D5P58170 312 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 DUSP7Q16829 419 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 NKAIN2Q5VXU1 208 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 OR2L13Q8N349 312 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 OR7G2Q8NG99 324 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 GIMAP5Q96F15 307 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 C16orf58Q96GQ5 468 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 OR7D2Q96RA2 312 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 YIPF4Q9BSR8 244 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 BTBD2Q9BX70 525 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 CLK4Q9HAZ1 481 aaKnown RBP20.65■□□□□ 0.9
PTPN13-205ENST00000502971 EXD2Q9NVH0 621 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 PDP1Q9P0J1 537 aaPredicted RBP20.65■□□□□ 0.9
PTPN13-205ENST00000502971 PILRBQ9UKJ0 227 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 LIPT1Q9Y234 373 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 MYRFQ9Y2G1 1151 aa20.65■□□□□ 0.9
PTPN13-205ENST00000502971 A0A0G2JPF8 293 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 BLACEA4D250 179 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 PRAMEF25A6NGN4 478 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 DUXAA6NLW8 204 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 HNRNPCL2B2RXH8 293 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 HNRNPCL3B7ZW38 293 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 CHST10O43529 356 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 DUX1O43812 170 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 FGF17O60258 216 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 HNRNPCL4P0DMR1 293 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 ETS2P15036 469 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 TNFRSF1BP20333 461 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 MAN2A2P49641 1150 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 GPLD1P80108 840 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 PLXDC1Q8IUK5 500 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 TMEM52Q8NDY8 209 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 ADAMTS18Q8TE60 1221 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 PROX1Q92786 737 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 FAM118AQ9NWS6 357 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 TMEFF2Q9UIK5 374 aaPredicted RBP20.64■□□□□ 0.9
PTPN13-205ENST00000502971 SH3GLB1Q9Y371 365 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 FAM32AQ9Y421 112 aaKnown RBP20.64■□□□□ 0.9
PTPN13-205ENST00000502971 ENPP4Q9Y6X5 453 aa20.64■□□□□ 0.9
PTPN13-205ENST00000502971 HYKKA2RU49 373 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 H3BNH8 94 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 BMP10O95393 424 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 NSA2O95478 260 aaKnown RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 AGR2O95994 175 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 IFNW1P05000 195 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 FESP07332 822 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 SMIM18P0DKX4 95 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 XCR1P46094 333 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 KCNJ5P48544 419 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 INAVAQ3KP66 663 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF628Q5EBL2 1059 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 APOBEC4Q8WW27 367 aaKnown RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 RMND5BQ96G75 393 aaPredicted RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 COL21A1Q96P44 957 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 MBOAT4Q96T53 435 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 BARD1Q99728 777 aaKnown RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 MRPS26Q9BYN8 205 aaKnown RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 AMBRA1Q9C0C7 1298 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 SOX17Q9H6I2 414 aaPredicted RBP20.64■□□□□ 0.89
PTPN13-205ENST00000502971 CALML5Q9NZT1 146 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 SEC14L3Q9UDX4 400 aa20.64■□□□□ 0.89
PTPN13-205ENST00000502971 A0A087WV62 115 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 A0A0A6YYC8 382 aaPredicted RBP20.63■□□□□ 0.89
PTPN13-205ENST00000502971 FITM1A5D6W6 292 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 FAM227AF5H4B4 570 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 I3L1I5 382 aaPredicted RBP20.63■□□□□ 0.89
PTPN13-205ENST00000502971 TNFRSF11BO00300 401 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 FOXS1O43638 330 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 LDB3O75112 727 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 RHCEP18577 417 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 IGFBP5P24593 272 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 EMP3P54852 163 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 SRSF5Q13243 272 aaKnown RBP20.63■□□□□ 0.89
PTPN13-205ENST00000502971 PLK5Q496M5 336 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 ATAD3BQ5T9A4 648 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 ANKRD34AQ69YU3 496 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms