RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 QSOX2Q6ZRP7 698 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 THOC6Q86W42 341 aaKnown RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 GAS2L3Q86XJ1 694 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 ZNF321PQ8N8H1 164 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 ANKRD53Q8N9V6 530 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 POGLUT1Q8NBL1 392 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 RELL2Q8NC24 303 aaPredicted RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 APCDD1LQ8NCL9 501 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 PSD4Q8NDX1 1056 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 B3GNT7Q8NFL0 401 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 OR4K1Q8NGD4 311 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 OR56A3Q8NH54 315 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 C16orf52Q8NHV5 167 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 NT5CQ8TCD5 201 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 CALML6Q8TD86 181 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 ASB15Q8WXK1 588 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 RNASE6Q93091 150 aaKnown RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 PIGTQ969N2 578 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 KIAA1191Q96A73 305 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 CFAP36Q96G28 342 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 VMP1Q96GC9 406 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 FAR2Q96K12 515 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 SMC6Q96SB8 1091 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 CSF3RQ99062 836 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 FAM167BQ9BTA0 163 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 CNPPD1Q9BV87 410 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 SARGQ9BW04 601 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 TRIM54Q9BYV2 358 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 AMBRA1Q9C0C7 1298 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 AICDAQ9GZX7 198 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 LDAHQ9H6V9 325 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 XAB2Q9HCS7 855 aaKnown RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 PPANQ9NQ55 473 aaKnown RBP5.09□□□□□ -1.59
SPTA1-209ENST00000498708 HPF1Q9NWY4 346 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 GFOD1Q9NXC2 390 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 TAS2R13Q9NYV9 303 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 KLHL14Q9P2G3 628 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 ACAD8Q9UKU7 415 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 SLC22A14Q9Y267 594 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 NPFFR2Q9Y5X5 522 aa5.09□□□□□ -1.59
SPTA1-209ENST00000498708 IGKV3D-11A0A0A0MRZ8 115 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 URADA6NGE7 173 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TUBAL3A6NHL2 446 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NCF1BA6NI72 391 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NCF1CA8MVU1 366 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ACOT7O00154 380 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 EIF3FO00303 357 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ERI3O43414 337 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TLX2O43763 284 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CD5LO43866 347 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF354AO60765 605 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ZFAND5O76080 213 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 WDR47O94967 919 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SOX30O94993 753 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 LRATO95237 230 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TUBB4AP04350 444 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SMIM10L1P0DMW3 83 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 IMPDH2P12268 514 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 MLNP12872 115 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NCF1P14598 390 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 PGAM1P18669 254 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ACVR2AP27037 513 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CERS1P27544 350 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 HNRNPH1P31943 449 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 PIGAP37287 484 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SOX3P41225 446 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 GDF5P43026 501 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 MAGEA5P43359 124 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 MAGEA6P43360 314 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 PLA2G16P53816 162 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 RAB38P57729 211 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 IL2P60568 153 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SKP1P63208 163 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 REEP5Q00765 189 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SP140Q13342 867 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF460Q14592 562 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CRYMQ14894 314 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CCDC92Q53HC0 331 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 UBAP2Q5T6F2 1119 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ADNP2Q6IQ32 1131 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 LRRC8EQ6NSJ5 796 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 C16orf87Q6PH81 154 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 CCDC137Q6PK04 289 aaKnown RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 B3GNT6Q6ZMB0 384 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 FAM47EQ6ZV65 393 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 KRT77Q7Z794 578 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 LCA5Q86VQ0 697 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TMEM251Q8N6I4 163 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NAT8LQ8N9F0 302 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ZFP62Q8NB50 900 aaPredicted RBP5.08□□□□□ -1.6
SPTA1-209ENST00000498708 MCUQ8NE86 351 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 TRPV3Q8NET8 790 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 NUP43Q8NFH3 380 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ABHD11Q8NFV4 315 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 OR2M7Q8NG81 312 aa5.08□□□□□ -1.6
SPTA1-209ENST00000498708 ESAMQ96AP7 390 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms