RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 TRMT12Q53H54 448 aaKnown RBP16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 NOXRED1Q6NXP6 359 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 DDIASQ8IXT1 998 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 CCDC116Q8IYX3 515 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 PRR22Q8IZ63 422 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 LRRC25Q8N386 305 aaPredicted RBP16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 VWA5B2Q8N398 1253 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 ZNF441Q8N8Z8 693 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 C7orf57Q8NEG2 295 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 OR9A2Q8NGT5 310 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 C16orf52Q8NHV5 167 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 KAT2AQ92830 837 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 EGLN2Q96KS0 407 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 TRMOQ9BU70 441 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 TIMMDC1Q9NPL8 285 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 SIRT5Q9NXA8 310 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 EXO1Q9UQ84 846 aaKnown RBP16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 DNAJC13O75165 2243 aa16.22■□□□□ 0.19
RHBDD3-207ENST00000496342 C2orf92A0A1B0GVN3 265 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 SEC22BO75396 215 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 SKAP2O75563 359 aaPredicted RBP16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 CBX7O95931 251 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 ATP1B1P05026 303 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 TUBBP07437 444 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 DNASE1L1P49184 302 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 KIAA0040Q15053 153 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 MPEG1Q2M385 716 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 GALNTL6Q49A17 601 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 BEND6Q5SZJ8 279 aaPredicted RBP16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 C6orf163Q5TEZ5 329 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 PRAMEF20Q5VT98 475 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 FAM71E1Q6IPT2 247 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 RTL4Q6ZR62 310 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 TICAM1Q8IUC6 712 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 GPALPP1Q8IXQ4 340 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 OR5M3Q8NGP4 307 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 OR6Y1Q8NGX8 325 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 CLHC1Q8NHS4 586 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 SLC22A8Q8TCC7 542 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 GPR137Q96N19 417 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 ITPAQ9BY32 194 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 LRTM1Q9HBL6 345 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 BCAP29Q9UHQ4 241 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 ZDHHC2Q9UIJ5 367 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 ZNF780BQ9Y6R6 833 aa16.21■□□□□ 0.19
RHBDD3-207ENST00000496342 PTPN13Q12923 2485 aa16.21■□□□□ 0.18
RHBDD3-207ENST00000496342 FAM166BA8MTA8 275 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 SLC28A1O00337 649 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 CDK2AP1O14519 115 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 HS6ST1O60243 411 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 DRD2P14416 443 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 GPX3P22352 226 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 PIGAP37287 484 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 CHI3L2Q15782 390 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ZNF791Q3KP31 576 aaPredicted RBP16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ZNF628Q5EBL2 1059 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 HIST2H2BCQ6DN03 193 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 DESI1Q6ICB0 168 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ANKRD26P1Q6NSI1 321 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 OPN5Q6U736 354 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 LRIG3Q6UXM1 1119 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 FJX1Q86VR8 437 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 NUDCD3Q8IVD9 361 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ANKRD42Q8N9B4 389 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 FAM13CQ8NE31 585 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 OR2M7Q8NG81 312 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 OR10G3Q8NGC4 313 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 OR52R1Q8NGF1 315 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 SSC4DQ8WTU2 575 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ADIPOR1Q96A54 375 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 SPACA9Q96E40 222 aaPredicted RBP16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 NXF5Q9H1B4 397 aaKnown RBP16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 KCNK9Q9NPC2 374 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 MYNNQ9NPC7 610 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 SLC35C2Q9NQQ7 365 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 C1orf109Q9NX04 203 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ZNF639Q9UID6 485 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 PSME2Q9UL46 239 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 ENTPD4Q9Y227 616 aa16.2■□□□□ 0.18
RHBDD3-207ENST00000496342 A1L4Q6 167 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 OR6C76A6NM76 312 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 KLRC4-KLRK1H3BQV0 150 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 TFECO14948 347 aaPredicted RBP16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 LSM1O15116 133 aaKnown RBP16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 LRRTM2O43300 516 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 RGS14O43566 566 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 LDLRP01130 860 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 JUNP05412 331 aaKnown RBP16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 FBXO45P0C2W1 286 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 DHRS4L1P0CG22 281 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 SDC1P18827 310 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 DDCP20711 480 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 PRPH2P23942 346 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 MAP4K2Q12851 820 aa16.19■□□□□ 0.18
RHBDD3-207ENST00000496342 HEPACAMQ14CZ8 416 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms