RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 LSP1P33241 339 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 S100A3P33764 101 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 FRKP42685 505 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-235ENST00000495515 NME5P56597 212 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 SLC37A1P57057 533 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 UFM1P61960 85 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 GNGT1P63211 74 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 RNF4P78317 190 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 DUSP2Q05923 314 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 MFAP5Q13361 173 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 MLC1Q15049 377 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 LTB4RQ15722 352 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 PRSS53Q2L4Q9 553 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 LACTB2Q53H82 288 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF385BQ569K4 471 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 ACER2Q5QJU3 275 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 ANXA8L1Q5VT79 327 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 METTL21CQ5VZV1 264 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 HLA-DQA1Q5Y7H0 255 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 FAM111BQ6SJ93 734 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF321PQ8N8H1 164 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 OR8J2Q8NGG1 315 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 NUBPLQ8TB37 319 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 DOK4Q8TEW6 326 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 OR5P2Q8WZ92 322 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 CIDECQ96AQ7 238 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-235ENST00000495515 MARK4Q96L34 752 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 TMEM120AQ9BXJ8 343 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 OR10A5Q9H207 317 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 RABEP2Q9H5N1 569 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 CLMPQ9H6B4 373 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 STMN3Q9NZ72 180 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 BCAP29Q9UHQ4 241 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF639Q9UID6 485 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 PCDHGB4Q9UN71 923 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 A0A087WV62 115 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 DYTNA2CJ06 578 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 HRKO00198 91 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 PLOD2O00469 737 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ATXN7O15265 892 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 COQ9O75208 318 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 SSTR4P31391 388 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 MRPL19P49406 292 aaKnown RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ATP4BP51164 291 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 GYS2P54840 703 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 MGAT2Q10469 447 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 HSPB3Q12988 150 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 MPEG1Q2M385 716 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 LINC00696Q6ZRV3 163 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ASB18Q6ZVZ8 466 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ZNF551Q7Z340 670 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ARMC10Q8N2F6 343 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ZADH2Q8N4Q0 377 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 EXD3Q8N9H8 876 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 KAT2AQ92830 837 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 SLC25A18Q9H1K4 315 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 CDCP1Q9H5V8 836 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 C3orf14Q9HBI5 128 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 SLAMF7Q9NQ25 335 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 DDX18Q9NVP1 670 aaKnown RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 TMEM45AQ9NWC5 275 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 FAM53CQ9NYF3 392 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 ZNF223Q9UK11 482 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-235ENST00000495515 TP53TG5Q9Y2B4 290 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 LAMA5O15230 3695 aa15.89■□□□□ 0.13
HDAC6-235ENST00000495515 GMNCA6NCL1 334 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 RNASET2O00584 256 aaKnown RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 CFLARO15519 480 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 DPM1O60762 260 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 IL6P05231 212 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 NCF2P19878 526 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 S1PR1P21453 382 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 PTGER1P34995 402 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 CASRP41180 1078 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 MLF1P58340 268 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 LRRC74AQ0VAA2 488 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 SQLEQ14534 574 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 FAM174BQ3ZCQ3 159 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 TRMT12Q53H54 448 aaKnown RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 B3GNTL1Q67FW5 361 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 IGFL2Q6UWQ7 119 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 TMEM107Q6UX40 140 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 IGFL3Q6UXB1 125 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 CPLX4Q7Z7G2 160 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 AMER2Q8N7J2 671 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 ZNF615Q8N8J6 731 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 OR52R1Q8NGF1 315 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 THAP3Q8WTV1 239 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 ELP4Q96EB1 424 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 RNF32Q9H0A6 362 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 FAM120CQ9NX05 1096 aaKnown RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 TAS2R9Q9NYW1 312 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 MYOTQ9UBF9 498 aa15.88■□□□□ 0.13
HDAC6-235ENST00000495515 YARS2Q9Y2Z4 477 aaKnown RBP15.88■□□□□ 0.13
HDAC6-235ENST00000495515 PRSS51A0A1B0GVH4 220 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 C2orf92A0A1B0GVN3 265 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 CBX7O95931 251 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms