RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 RAB38P57729 211 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 B3GALT5-AS1P59052 145 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 POU4F1Q01851 419 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 RGS1Q08116 209 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 STX4Q12846 297 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 MAP4K2Q12851 820 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 PWP1Q13610 501 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 RPS6KA2Q15349 733 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 PPP1R2P3Q6NXS1 205 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 AFTPHQ6ULP2 937 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 LIAT1Q6ZQX7 453 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 CHMP1BQ7LBR1 199 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 FBXL14Q8N1E6 418 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 RHBDF1Q96CC6 855 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 TMEM41AQ96HV5 264 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 C1orf147Q96MC9 270 aaPredicted RBP7.85□□□□□ -1.15
GARNL3-219ENST00000495172 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 NODALQ96S42 347 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 HBEGFQ99075 208 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 RBM4BQ9BQ04 359 aaKnown RBP7.85□□□□□ -1.15
GARNL3-219ENST00000495172 C19orf43Q9BQ61 176 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 NARFLQ9H6Q4 476 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 DDX28Q9NUL7 540 aaKnown RBP7.85□□□□□ -1.15
GARNL3-219ENST00000495172 SLC17A6Q9P2U8 582 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 GPR52Q9Y2T5 361 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 SPEF1Q9Y4P9 236 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 MRFAP1Q9Y605 127 aa7.85□□□□□ -1.15
GARNL3-219ENST00000495172 WNK2Q9Y3S1 2297 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 GCM2O75603 506 aaPredicted RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 CLPSP04118 112 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FESP07332 822 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 CCDC172P0C7W6 258 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 PSMB1P20618 241 aaKnown RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 HRH2P25021 359 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 PSMA3P25788 255 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 CNTFP26441 200 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 GCH1P30793 250 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 HNRNPH1P31943 449 aaKnown RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 GCKP35557 465 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 HERVK_113P63132 956 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 ERVK-8P63133 956 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 PHC1P78364 1004 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 UBXN1Q04323 297 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 TBL3Q12788 808 aaKnown RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 NAE1Q13564 534 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 STK11Q15831 433 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 NNATQ16517 81 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FASTKD1Q53R41 847 aaKnown RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 TBCELQ5QJ74 424 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FAHD2BQ6P2I3 314 aaPredicted RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 CCDC25Q86WR0 208 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 CDKL3Q8IVW4 592 aaPredicted RBP7.84□□□□□ -1.15
GARNL3-219ENST00000495172 SLC15A4Q8N697 577 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 SIGLECL1Q8N7X8 197 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 ASB11Q8WXH4 323 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FAHD2AQ96GK7 314 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 BIRC8Q96P09 236 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 DHRS9Q9BPW9 319 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 SUCNR1Q9BXA5 334 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 ERVK-6Q9BXR3 956 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 SLITRK2Q9H156 845 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 METTL7AQ9H8H3 244 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FAM114A2Q9NRY5 505 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 FBXO34Q9NWN3 711 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 EHD3Q9NZN3 535 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 WHRNQ9P202 907 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 POU2F3Q9UKI9 436 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 ERVK-19Q9WJR5 959 aa7.84□□□□□ -1.15
GARNL3-219ENST00000495172 LOC390937A0A1W2PQ73 354 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 TRBC2A0A5B9 178 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 DNAJC9-AS1A6NH13 148 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ZNF839A8K0R7 811 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 LYNX1G3V0Z9 82 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 H7C0C1 242 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 NDUFS8O00217 210 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 TP53I11O14683 189 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 CTNSO60931 367 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ICOSLGO75144 302 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 LYNX1P0DP58 116 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 NPPBP16860 134 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ZFXP17010 805 aaPredicted RBP7.83□□□□□ -1.16
GARNL3-219ENST00000495172 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
GARNL3-219ENST00000495172 RPL22P35268 128 aaKnown RBP7.83□□□□□ -1.16
GARNL3-219ENST00000495172 HSD17B2P37059 387 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 CDKN2BP42772 138 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 SCTRP47872 440 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ATP5OP48047 213 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 LIM2P55344 173 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 SKP1P63208 163 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 EBPQ15125 230 aaKnown RBP7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ASPHD2Q6ICH7 369 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 MFSD12Q6NUT3 480 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 GLCCI1Q86VQ1 547 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 ZNF595Q8IYB9 648 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 KIR3DL3Q8N743 410 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 STEAP2Q8NFT2 490 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 OR6K3Q8NGY3 331 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 OR2W6PQ8NHA6 318 aa7.83□□□□□ -1.16
GARNL3-219ENST00000495172 GIMAP7Q8NHV1 300 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms