RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	T-ENOL	P0DO92	83 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	ICAM2	P13598	275 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	MC3R	P41968	323 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	CDK9	P50750	372 aa	Known RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	FUT7	Q11130	342 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	FADD	Q13158	208 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	ZNHIT3	Q15649	155 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	PRSS53	Q2L4Q9	553 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	CRTC2	Q53ET0	693 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	PAPD4	Q6PIY7	484 aa	Known RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	TMEM107	Q6UX40	140 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	DLEU7	Q6UYE1	221 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	SHISA6	Q6ZSJ9	500 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	SZRD1	Q7Z422	152 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	SNIP1	Q8TAD8	396 aa	Known RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	NEURL3	Q96EH8	262 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	FAM120B	Q96EK7	910 aa	Known RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	RNF31	Q96EP0	1072 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	SLC35G5	Q96KT7	338 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	BTBD10	Q9BSF8	475 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	INPP5K	Q9BT40	448 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	CNPPD1	Q9BV87	410 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	DPH1	Q9BZG8	443 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	ZNF700	Q9H0M5	742 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	CXorf36	Q9H7Y0	433 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	TPT1P8	Q9HAU6	139 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	FAF1	Q9UNN5	650 aa	Predicted RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	PPIE	Q9UNP9	301 aa	Known RBP	12.65	□□□□□ -0.38
APTX-231	ENST00000494973	PCDHB14	Q9Y5E9	798 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	PCDHGB3	Q9Y5G1	929 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	LOC101059948	A0A1B0GTJ6	334 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	TMEM247	A6NEH6	219 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	DUXA	A6NLW8	204 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	TGFBR3L	H3BV60	316 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	FXYD1	O00168	92 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	CLIC1	O00299	241 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ASNA1	O43681	348 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	CREG1	O75629	220 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	EFNA1	P20827	205 aa	Predicted RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	CDKN2C	P42773	168 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	KHK	P50053	298 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	PGD	P52209	483 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	PSME3	P61289	254 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	DCAF7	P61962	342 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	GAB1	Q13480	694 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	COL9A2	Q14055	689 aa	Predicted RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ZNF267	Q14586	743 aa	Predicted RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	LTB4R	Q15722	352 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ZNF750	Q32MQ0	723 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	RUNDC3A	Q59EK9	446 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	SAXO2	Q658L1	398 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	FAM180B	Q6P0A1	224 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ANGPTL8	Q6UXH0	198 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	BNC2	Q6ZN30	1099 aa	Predicted RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	RNF111	Q6ZNA4	994 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	NDUFAF7	Q7L592	441 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	CDRT4	Q8N9R6	151 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	RBM15B	Q8NDT2	890 aa	Known RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	NUP43	Q8NFH3	380 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	B3GNT7	Q8NFL0	401 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	TNIP2	Q8NFZ5	429 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	OR52N2	Q8NGI0	321 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	OR1N1	Q8NGS0	311 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ZFP90	Q8TF47	636 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	NUDT8	Q8WV74	236 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	KCNE4	Q8WWG9	221 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	VMP1	Q96GC9	406 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	GPATCH1	Q9BRR8	931 aa	Known RBP	12.64	□□□□□ -0.39
APTX-231	ENST00000494973	LRMDA	Q9H2I8	198 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	IL1RL2	Q9HB29	575 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	VAPA	Q9P0L0	249 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ZNF639	Q9UID6	485 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	ANGPTL2	Q9UKU9	493 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	HS3ST3B1	Q9Y662	390 aa		12.64	□□□□□ -0.39
APTX-231	ENST00000494973	SCN2A	Q99250	2005 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	IGHV1-45	A0A0A0MS14	117 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	NSG1	A0A0A6YYJ2	146 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	UPK1A	O00322	258 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	AK1	P00568	194 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	HP	P00738	406 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	GSN	P06396	782 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	HOXB9	P17482	250 aa	Predicted RBP	12.63	□□□□□ -0.39
APTX-231	ENST00000494973	PTPN6	P29350	595 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	OTX2	P32243	289 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	DUSP2	Q05923	314 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	GNA13	Q14344	377 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	SAMD4B	Q5PRF9	694 aa	Known RBP	12.63	□□□□□ -0.39
APTX-231	ENST00000494973	FHL5	Q5TD97	284 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	FAAH2	Q6GMR7	532 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	C8orf82	Q6P1X6	216 aa	Predicted RBP	12.63	□□□□□ -0.39
APTX-231	ENST00000494973	ERICH5	Q6P6B1	374 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	LANCL3	Q6ZV70	420 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	SLC29A4	Q7RTT9	530 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	SERPINA11	Q86U17	422 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	SLC30A8	Q8IWU4	369 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	DEFB107A	Q8IZN7	70 aa		12.63	□□□□□ -0.39
APTX-231	ENST00000494973	ADCY4	Q8NFM4	1077 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms