RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PRICKLE4Q2TBC4 344 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF791Q3KP31 576 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CLEC6AQ6EIG7 209 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 SPPL2CQ8IUH8 684 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 C17orf47Q8NEP4 570 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 C11orf24Q96F05 449 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CNRIP1Q96F85 164 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CNIH4Q9P003 139 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 SLC17A7Q9P2U7 560 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 HEY2Q9UBP5 337 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 PLEKHB1Q9UF11 243 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 SH3BGRL2Q9UJC5 107 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CCL21O00585 134 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 PRRG2O14669 202 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 HS6ST1O60243 411 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 CDC40O60508 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC4-211ENST00000494800 NADKO95544 446 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-211ENST00000494800 CLPSP04118 112 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 MYZAPP0CAP1 466 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 DDCP20711 480 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 MPIP34949 423 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 PPIAP62937 165 aaKnown RBP16.28■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF844Q08AG5 666 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 C2orf80Q0P641 193 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 RNFT1Q5M7Z0 435 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 RNF165Q6ZSG1 346 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 IKBIPQ70UQ0 350 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF615Q8N8J6 731 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 PPP1R14CQ8TAE6 165 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 ERP27Q96DN0 273 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 CENPHQ9H3R5 247 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 SLC35C2Q9NQQ7 365 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 DEPPQ9NTK1 212 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 C1orf109Q9NX04 203 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 MAT2BQ9NZL9 334 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 COL12A1Q99715 3063 aa16.28■□□□□ 0.2
HDAC4-211ENST00000494800 A1L4Q6 167 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 G3V3Y1 287 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF354AO60765 605 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ERLIN1O75477 346 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 CCL3P10147 92 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 PRPH2P23942 346 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 DCAF7P61962 342 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 KCNJ2P63252 427 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 TBCELQ5QJ74 424 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 KANK2Q63ZY3 851 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 NOXRED1Q6NXP6 359 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ARHGAP11AQ6P4F7 1023 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 MAMDC2Q7Z304 686 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-211ENST00000494800 CCDC116Q8IYX3 515 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 CLYBLQ8N0X4 340 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 FBXW8Q8N3Y1 598 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF441Q8N8Z8 693 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ADCY4Q8NFM4 1077 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF675Q8TD23 568 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 PAQR8Q8TEZ7 354 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 MECRQ9BV79 373 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 TTTY12Q9BZ98 90 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 IL1RL2Q9HB29 575 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 LRTM1Q9HBL6 345 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 MYNNQ9NPC7 610 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 BOKQ9UMX3 212 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF835Q9Y2P0 537 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 POLR3HQ9Y535 204 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-211ENST00000494800 NPFFR2Q9Y5X5 522 aa16.27■□□□□ 0.2
HDAC4-211ENST00000494800 FGF4P08620 206 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 RNF224P0DH78 156 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 GPX3P22352 226 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 NTSP30990 170 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 PTGER1P34995 402 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 PTGS2P35354 604 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 RPS6KA2Q15349 733 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 NTRK2Q16620 822 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 CMPK2Q5EBM0 449 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 ARL13AQ5H913 290 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 CEP85LQ5SZL2 805 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 FAM180BQ6P0A1 224 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 FAM111BQ6SJ93 734 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 LYPD8Q6UX82 237 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 RPTNQ6XPR3 784 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 Q6ZPB1 254 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 DDIASQ8IXT1 998 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 FAM9CQ8IZT9 166 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 OR10G3Q8NGC4 313 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 OR52R1Q8NGF1 315 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 OR5M3Q8NGP4 307 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 ADIPOR1Q96A54 375 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 CTHRC1Q96CG8 243 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 SECISBP2Q96T21 854 aaKnown RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 STMN4Q9H169 189 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 SSU72Q9NP77 194 aaKnown RBP16.26■□□□□ 0.19
HDAC4-211ENST00000494800 TNFRSF12AQ9NP84 129 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 B4GALT7Q9UBV7 327 aa16.26■□□□□ 0.19
HDAC4-211ENST00000494800 ZNF639Q9UID6 485 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms