RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 METTL21CQ5VZV1 264 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 ZNF793Q6ZN11 406 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 MIER2Q8N344 545 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 GALNT16Q8N428 558 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 ACOT4Q8N9L9 421 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 CLHC1Q8NHS4 586 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 MMABQ96EY8 250 aaPredicted RBP11.39□□□□□ -0.59
UPF3A-210ENST00000493727 TSSK3Q96PN8 268 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 SERINC2Q96SA4 455 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 ZBTB18Q99592 522 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 MRGBPQ9NV56 204 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 AIG1Q9NVV5 245 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 LYARQ9NX58 379 aaKnown RBP11.39□□□□□ -0.59
UPF3A-210ENST00000493727 P4HTMQ9NXG6 502 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 DHCR7Q9UBM7 475 aaKnown RBP11.39□□□□□ -0.59
UPF3A-210ENST00000493727 NXT1Q9UKK6 140 aaKnown RBP11.39□□□□□ -0.59
UPF3A-210ENST00000493727 FBXW2Q9UKT8 454 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 CDC14AQ9UNH5 594 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 B3GNT3Q9Y2A9 372 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 DLGAP4Q9Y2H0 992 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 NAALAD2Q9Y3Q0 740 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 SPACA6W5XKT8 324 aa11.39□□□□□ -0.59
UPF3A-210ENST00000493727 CELSR1Q9NYQ6 3014 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 A0A0A6YYD5 115 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 A0A1B0GX78 115 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 SGK494L7N484 410 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 FCHO1O14526 889 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 DSCR3O14972 297 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 GALR3O60755 368 aaPredicted RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 GUCY1B2O75343 617 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 SDC1P18827 310 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 HPCAL1P37235 193 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 ASMTP46597 345 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 SOX8P57073 446 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 OLR1P78380 273 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 RAE1P78406 368 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 GABPB1Q06547 395 aaPredicted RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 AIMP2Q13155 320 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 SLAMF1Q13291 335 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 FAM53BQ14153 422 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 KIAA0040Q15053 153 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 GALNT18Q6P9A2 607 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 IGFL3Q6UXB1 125 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 PRSS41Q7RTY9 318 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 TMEM132CQ8N3T6 1108 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 ZCCHC7Q8N3Z6 543 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 ZADH2Q8N4Q0 377 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 OR9A4Q8NGU2 314 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 MVB12AQ96EY5 273 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 FCRL1Q96LA6 429 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 LRRC37BQ96QE4 947 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 YIPF2Q9BWQ6 316 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 FAIM2Q9BWQ8 316 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 ZNF717Q9BY31 904 aaPredicted RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 DPY30Q9C005 99 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 NMUR2Q9GZQ4 415 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 DDX31Q9H8H2 851 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 WDR54Q9H977 334 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 SIRT5Q9NXA8 310 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 LUZP4Q9P127 313 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 HCN3Q9P1Z3 774 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 PHF11Q9UIL8 331 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 COPG1Q9Y678 874 aaKnown RBP11.38□□□□□ -0.59
UPF3A-210ENST00000493727 CROCCQ5TZA2 2017 aa11.38□□□□□ -0.59
UPF3A-210ENST00000493727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 PSMD12O00232 456 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 AKAP10O43572 662 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 TMPRSS11DO60235 418 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 LRATO95237 230 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 NSA2O95478 260 aaKnown RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 ONECUT2O95948 504 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 FAM58BPP0C7Q3 252 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 ITGAXP20702 1163 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 FBLP22087 321 aaKnown RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 MMP11P24347 488 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 BUD31P41223 144 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 GSTM5P46439 218 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 ATP4BP51164 291 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 TAS2R50P59544 299 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 TRA2BP62995 288 aaKnown RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 IRX1P78414 480 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 RAPSNQ13702 412 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 PTGR1Q14914 329 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 PDCD4Q53EL6 469 aaKnown RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 IRAK1BP1Q5VVH5 260 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 PDSS2Q86YH6 399 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 AMER3Q8N944 861 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 C16orf78Q8WTQ4 265 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 GFM2Q969S9 779 aaKnown RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
UPF3A-210ENST00000493727 NPLQ9BXD5 320 aaPredicted RBP11.37□□□□□ -0.59
UPF3A-210ENST00000493727 SLC26A1Q9H2B4 701 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms