RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FAM111BQ6SJ93 734 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 FAM9CQ8IZT9 166 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 CYP4Z2PQ8N1L4 340 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 CISD2Q8N5K1 135 aaKnown RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 OR9A2Q8NGT5 310 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF75CPQ92670 426 aaPredicted RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 PPCDCQ96CD2 204 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 RASL10BQ96S79 203 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 WWTR1Q9GZV5 400 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 REEP4Q9H6H4 257 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 TAS2R7Q9NYW3 318 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 EXO1Q9UQ84 846 aaKnown RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 EIF3LQ9Y262 564 aaKnown RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 COPG1Q9Y678 874 aaKnown RBP11.85□□□□□ -0.51
CLIP2-209ENST00000493166 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
CLIP2-209ENST00000493166 C2orf92A0A1B0GVN3 265 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 A8MVJ9 347 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 MYO1GB0I1T2 1018 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SLCO1B7G3V0H7 640 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 J3QKU1 62 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 HDAC3O15379 428 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PDPK1O15530 556 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 VPS4BO75351 444 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SLC25A12O75746 678 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 NEURL1O76050 574 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PRPS2P11908 318 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PCSK2P16519 638 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 DDX5P17844 614 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SOX3P41225 446 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 NCBP2P52298 156 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 MRPS35P82673 323 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 MGAT2Q10469 447 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PTGR1Q14914 329 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 EXOSC7Q15024 291 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 CEBPEQ15744 281 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 INAQ16352 499 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 MPEG1Q2M385 716 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SMU1Q2TAY7 513 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF628Q5EBL2 1059 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 IL23RQ5VWK5 629 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 HLA-DQA1Q5Y7H0 255 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ANKRD26P1Q6NSI1 321 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 FAM180AQ6UWF9 173 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 R3HCC1LQ7Z5L2 792 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 GPALPP1Q8IXQ4 340 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 TMEM178AQ8NBL3 297 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 OR52R1Q8NGF1 315 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SLC22A8Q8TCC7 542 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF675Q8TD23 568 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 KAT2AQ92830 837 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 TMEM125Q96AQ2 219 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 CTHRC1Q96CG8 243 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SNRNP40Q96DI7 357 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 HES7Q9BYE0 225 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 AKTIPQ9H8T0 292 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 TRIM45Q9H8W5 580 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 MEAF6Q9HAF1 191 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 HPF1Q9NWY4 346 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 NOP53Q9NZM5 478 aaKnown RBP11.84□□□□□ -0.51
CLIP2-209ENST00000493166 SH3BP4Q9P0V3 963 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ZNF639Q9UID6 485 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 ERVK-11Q9UQG0 969 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 CFL2Q9Y281 166 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 PCDHGB6Q9Y5F9 930 aa11.84□□□□□ -0.51
CLIP2-209ENST00000493166 NUP214P35658 2090 aaPredicted RBP11.83□□□□□ -0.51
CLIP2-209ENST00000493166 SVILO95425 2214 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 TRPC5OSA6NMA1 111 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 PYCARD-AS1I3L0S3 204 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 TBX19O60806 448 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 OR6B1O95007 311 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 RASAL1O95294 804 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 CBX7O95931 251 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 SP1P08047 785 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 S1PR1P21453 382 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 RPL3P39023 403 aaKnown RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 EMX2Q04743 252 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 PDE7AQ13946 482 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 TRMT12Q53H54 448 aaKnown RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 SLC25A25Q6KCM7 469 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 OPN5Q6U736 354 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 IL20RBQ6UXL0 311 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 SLC15A4Q8N697 577 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 FAM98AQ8NCA5 519 aaKnown RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 C16orf52Q8NHV5 167 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-209ENST00000493166 MIB2Q96AX9 1013 aa11.83□□□□□ -0.52
CLIP2-209ENST00000493166 ERP27Q96DN0 273 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms