RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZFP36L1Q07352 338 aaKnown RBP3.19□□□□□ -1.9
CLK1-213ENST00000492793 ABRAXAS2Q15018 415 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 LPAL2Q16609 132 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 LIPKQ5VXJ0 399 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 PLBD1Q6P4A8 553 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 REG3GQ6UW15 175 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 YRDCQ86U90 279 aaKnown RBP3.19□□□□□ -1.9
CLK1-213ENST00000492793 POM121L12Q8N7R1 296 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 BEST4Q8NFU0 473 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 FAM222BQ8WU58 562 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 FCGR1BQ92637 280 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
CLK1-213ENST00000492793 PNPLA2Q96AD5 504 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 APOOQ9BUR5 198 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 FTHL17Q9BXU8 183 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TMEM231Q9H6L2 316 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 ADGRL4Q9HBW9 690 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TUBGCP4Q9UGJ1 667 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 ZNF175Q9Y473 711 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 FKBP7Q9Y680 259 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 GPRASP1Q5JY77 1395 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 IGKV3D-20A0A0C4DH25 116 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 E9PAM4 449 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 CYB561D2O14569 222 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SSX5O60225 188 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SH3BGRLO75368 114 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SEC22BO75396 215 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 FRAT2O75474 233 aaPredicted RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 STAM2O75886 525 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 IGHG1P01857 330 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 RALAP11233 206 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 UCP1P25874 307 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 HMGCLP35914 325 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 BRCC3P46736 316 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 NUMBP49757 651 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SLC26A5P58743 744 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 TRA2BP62995 288 aaKnown RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 MYBPC1Q00872 1141 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 BNIP1Q12981 228 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 CYLC2Q14093 348 aaPredicted RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 SLC1A5Q15758 541 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SHROOM1Q2M3G4 852 aaPredicted RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 AGKQ53H12 422 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 HERC4Q5GLZ8 1057 aaPredicted RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 LDLRAP1Q5SW96 308 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 FAM182AQ5T1J6 154 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 IL23RQ5VWK5 629 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 TMEM26Q6ZUK4 368 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 C1orf186Q6ZWK4 172 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 GPR142Q7Z601 462 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 SLC22A16Q86VW1 577 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 GPBP1Q86WP2 473 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 LRRC49Q8IUZ0 686 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 ZNF619Q8N2I2 560 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 CENPSQ8N2Z9 138 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 KDM8Q8N371 416 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 COLGALT1Q8NBJ5 622 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 C17orf47Q8NEP4 570 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 OR52J3Q8NH60 311 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 BIRC7Q96CA5 298 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 ACCSQ96QU6 501 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 CBWD1Q9BRT8 395 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 KRT23Q9C075 422 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 Q9HAA7 133 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 NRN1Q9NPD7 142 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 LHX3Q9UBR4 397 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 BCAP29Q9UHQ4 241 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 MRPL11Q9Y3B7 192 aaKnown RBP3.18□□□□□ -1.9
CLK1-213ENST00000492793 ATG4BQ9Y4P1 393 aa3.18□□□□□ -1.9
CLK1-213ENST00000492793 NPC1L1Q9UHC9 1359 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 TRABD2BA6NFA1 517 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 PHF1O43189 567 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 RANBP6O60518 1105 aaKnown RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 NUDT14O95848 222 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 TGFAP01135 160 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 RABIFP47224 123 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ATXN3P54252 364 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 GMFBP60983 142 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 KARSQ15046 597 aaKnown RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 HAGHQ16775 308 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ANKRD55Q3KP44 614 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 CCDC92Q53HC0 331 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 TOR1AIP1Q5JTV8 583 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ACER2Q5QJU3 275 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 SEL1L3Q68CR1 1132 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 TATDN1Q6P1N9 297 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ISLR2Q6UXK2 745 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 DPY19L2P2Q6ZN68 376 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 MOB2Q70IA6 237 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 P4HA3Q7Z4N8 544 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ADGRD2Q7Z7M1 963 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 ZNF671Q8TAW3 534 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 U2AF1L4Q8WU68 220 aaKnown RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 FAM111AQ96PZ2 611 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms