RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TCP10LQ8TDR4 215 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 SPACA9Q96E40 222 aaPredicted RBP22.77■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF681Q96N22 645 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 SACM1LQ9NTJ5 587 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 UTS2RQ9UKP6 389 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 PCNX1Q96RV3 2341 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 FAM166BA8MTA8 275 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 H3BQF6 201 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 CCL21O00585 134 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 TRIM13O60858 407 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 ANXA4P09525 319 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-209ENST00000492270 UROSP10746 265 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 DUSP8Q13202 625 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 EXOSC7Q15024 291 aaKnown RBP22.76■■□□□ 1.23
UPF3A-209ENST00000492270 FAM47EQ6ZV65 393 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 SPPL2CQ8IUH8 684 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 SLC15A4Q8N697 577 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 SGCZQ96LD1 299 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 SH2D2AQ9NP31 389 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 SIRT5Q9NXA8 310 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 PSME2Q9UL46 239 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 FIS1Q9Y3D6 152 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 POLR3HQ9Y535 204 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-209ENST00000492270 FREM3P0C091 2139 aa22.76■■□□□ 1.23
UPF3A-209ENST00000492270 CDC40O60508 579 aaKnown RBP eCLIP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 LRATO95237 230 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 FBXO45P0C2W1 286 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 CNR1P21554 472 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 COL8A1P27658 744 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 PIGAP37287 484 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 PLGLB1Q02325 96 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 PRAMEF20Q5VT98 475 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 Q6ZPB1 254 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 MAMDC2Q7Z304 686 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 TRIM46Q7Z4K8 759 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 LRRC25Q8N386 305 aaPredicted RBP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 FAM13CQ8NE31 585 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 OR10G3Q8NGC4 313 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 CDC26Q8NHZ8 85 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 ADIPOR1Q96A54 375 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 EXOSC8Q96B26 276 aaKnown RBP22.75■■□□□ 1.23
UPF3A-209ENST00000492270 ZBTB9Q96C00 473 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 CCDC120Q96HB5 630 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 FAM173AQ9BQD7 235 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 TMEM109Q9BVC6 243 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 TTTY12Q9BZ98 90 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 PFDN4Q9NQP4 134 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 RAB21Q9UL25 225 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF780BQ9Y6R6 833 aa22.75■■□□□ 1.23
UPF3A-209ENST00000492270 P04436 131 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 DRD2P14416 443 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 ABOP16442 354 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 GPX3P22352 226 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 MRPS35P82673 323 aaKnown RBP22.74■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF844Q08AG5 666 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 MAP4K2Q12851 820 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 KRT71Q3SY84 523 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 TRMT12Q53H54 448 aaKnown RBP22.74■■□□□ 1.23
UPF3A-209ENST00000492270 HLA-DQA1Q5Y7H0 255 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 ZCCHC23Q6ZST2 131 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 OR7G1Q8NGA0 311 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 OR5M3Q8NGP4 307 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 PAQR8Q8TEZ7 354 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 SMC6Q96SB8 1091 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 DEFB127Q9H1M4 99 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 TUBA8Q9NY65 449 aaPredicted RBP22.74■■□□□ 1.23
UPF3A-209ENST00000492270 BCAP29Q9UHQ4 241 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF639Q9UID6 485 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 CCL27Q9Y4X3 112 aa22.74■■□□□ 1.23
UPF3A-209ENST00000492270 CHCHD2Q9Y6H1 151 aaPredicted RBP22.74■■□□□ 1.23
UPF3A-209ENST00000492270 A0A1B0GTH9 108 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 AZIN1O14977 448 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 RSL1D1O76021 490 aaKnown RBP22.73■■□□□ 1.23
UPF3A-209ENST00000492270 PDE9AO76083 593 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 CBX7O95931 251 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 CHRNGP07510 517 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 PCSK2P16519 638 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 PPIAP62937 165 aaKnown RBP22.73■■□□□ 1.23
UPF3A-209ENST00000492270 ZNF763Q0D2J5 394 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 FOXO1Q12778 655 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 HEPACAMQ14CZ8 416 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 NNATQ16517 81 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 PRSS53Q2L4Q9 553 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 SLC22A10Q63ZE4 541 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 BNC2Q6ZN30 1099 aaPredicted RBP22.73■■□□□ 1.23
UPF3A-209ENST00000492270 GK5Q6ZS86 529 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 CCDC116Q8IYX3 515 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 PRR22Q8IZ63 422 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 TP53INP1Q96A56 240 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 CTHRC1Q96CG8 243 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 ITPAQ9BY32 194 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 ANKRA2Q9H9E1 313 aa22.73■■□□□ 1.23
UPF3A-209ENST00000492270 RRAGDQ9NQL2 400 aaPredicted RBP22.73■■□□□ 1.23
UPF3A-209ENST00000492270 TMEM233B4DJY2 109 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 GLSO94925 669 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-209ENST00000492270 CASP6P55212 293 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 NTRK2Q16620 822 aa22.72■■□□□ 1.23
UPF3A-209ENST00000492270 NCCRP1Q6ZVX7 275 aaPredicted RBP22.72■■□□□ 1.23
UPF3A-209ENST00000492270 TAGAPQ8N103 731 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms