RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CARD16Q5EG05 197 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 XKR4Q5GH76 650 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RAB41Q5JT25 222 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SPANXN2Q5MJ10 180 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SYPL2Q5VXT5 272 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RNLSQ5VYX0 342 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LRRC66Q68CR7 880 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR4F3Q6IEY1 312 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2T5Q6IEZ7 315 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RETSATQ6NUM9 610 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM180BQ6P0A1 224 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CYP20A1Q6UW02 462 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF782Q6ZMW2 699 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GDPGP1Q6ZNW5 385 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 Q6ZSR9 355 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MSANTD1Q6ZTZ1 278 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GPRIN3Q6ZVF9 776 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ANKRD33Q7Z3H0 272 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 HDDC2Q7Z4H3 204 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 NRARPQ7Z6K4 114 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TAC4Q86UU9 113 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PIM3Q86V86 326 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CACUL1Q86Y37 369 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ENTHD1Q8IYW4 607 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ELMOD2Q8IZ81 293 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC39A11Q8N1S5 342 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CARNMT1Q8N4J0 409 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 NATD1Q8N6N6 113 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 NKAIN3Q8N8D7 197 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GLB1L3Q8NCI6 653 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 B3GALNT2Q8NCR0 500 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TOR1AIP2Q8NFQ8 470 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IPMKQ8NFU5 416 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR4M1Q8NGD0 313 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR56A4Q8NGH8 313 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2I1PQ8NGU4 316 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR5H6Q8NGV6 325 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2T29Q8NH02 315 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SPATA22Q8NHS9 363 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 C9orf43Q8TAL5 461 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC25A43Q8WUT9 341 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC13A3Q8WWT9 602 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DNASE1L2Q92874 299 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 FUBP1Q96AE4 644 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TCEAL4Q96EI5 215 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PHF21BQ96EK2 531 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RNF31Q96EP0 1072 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IMP4Q96G21 291 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM80Q96HE8 168 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MSLNLQ96KJ4 702 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 COL21A1Q96P44 957 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SMIM14Q96QK8 99 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 KCNA7Q96RP8 456 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC22A12Q96S37 553 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ACOX2Q99424 681 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PKMYT1Q99640 499 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 AIFM2Q9BRQ8 373 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RHNO1Q9BSD3 238 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 NDC1Q9BTX1 674 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 COLEC11Q9BWP8 271 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TTLL2Q9BWV7 592 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GTPBP2Q9BX10 602 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DUSP16Q9BY84 665 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ROGDIQ9GZN7 287 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CCDC90BQ9GZT6 254 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC22A4Q9H015 551 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 NUAK2Q9H093 628 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RACGAP1Q9H0H5 632 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 KCNN2Q9H2S1 579 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM245Q9H330 911 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PRDM13Q9H4Q3 707 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IKZF5Q9H5V7 419 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RPRD1BQ9NQG5 326 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DYRK4Q9NR20 520 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PLSCR3Q9NRY6 295 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 C1orf109Q9NX04 203 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IL20Q9NYY1 176 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC25A37Q9NYZ2 338 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PTTG3PQ9NZH4 202 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 VAPAQ9P0L0 249 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MARCH4Q9P2E8 410 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 STOML2Q9UJZ1 356 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ACAD8Q9UKU7 415 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 STUB1Q9UNE7 303 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ITM2BQ9Y287 266 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 BTBD3Q9Y2F9 522 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CAB39Q9Y376 341 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 YIPF1Q9Y548 306 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHB7Q9Y5E2 793 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CSNK1G3Q9Y6M4 447 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PRRC2BQ5JSZ5 2229 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LRP4O75096 1905 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 A0A0U1RQF3 1178 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 CENPVL1A0A0U1RR11 272 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 LRRC14BA6NHZ5 514 aa3.27□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM200CA6NKL6 621 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms