RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, human

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-222	ENST00000490207	ZDHHC11	Q9H8X9	412 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	IL1RL2	Q9HB29	575 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	OXSM	Q9NWU1	459 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	TUBA8	Q9NY65	449 aa	Predicted RBP	18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	MAT2B	Q9NZL9	334 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	HEY2	Q9UBP5	337 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	UTS2R	Q9UKP6	389 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	DLGAP4	Q9Y2H0	992 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	ZNF780B	Q9Y6R6	833 aa		18.21	■□□□□ 0.51
SMC4-222	ENST00000490207	UNC79	Q9P2D8	2635 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	NAV2	Q8IVL1	2488 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PRSS44	E7EML9	344 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PDE9A	O76083	593 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	SLU7	O95391	586 aa	Known RBP	18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PIGA	P37287	484 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	DUSP2	Q05923	314 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	BTK	Q06187	659 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	NTRK2	Q16620	822 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	IMPG1	Q17R60	797 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PRICKLE4	Q2TBC4	344 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PRAMEF20	Q5VT98	475 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	LIPM	Q5VYY2	423 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	FAM180B	Q6P0A1	224 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	ARHGAP11A	Q6P4F7	1023 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	DOLPP1	Q86YN1	238 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	EID3	Q8N140	333 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	LRRC25	Q8N386	305 aa	Predicted RBP	18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	FAM109A	Q8N4B1	249 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	TMEM251	Q8N6I4	163 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	AEN	Q8WTP8	325 aa	Known RBP	18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	TP53INP1	Q96A56	240 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	CNRIP1	Q96F85	164 aa	Predicted RBP	18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	APOPT1	Q96IL0	206 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PHF12	Q96QT6	1004 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	EBPL	Q9BY08	206 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	IQCG	Q9H095	443 aa	Known RBP	18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	PFDN4	Q9NQP4	134 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	MKS1	Q9NXB0	559 aa		18.2	■□□□□ 0.5
SMC4-222	ENST00000490207	CAPN14	A8MX76	684 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	DRD2	P14416	443 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	GPX3	P22352	226 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	MAGEA5	P43359	124 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	TMED10	P49755	219 aa	Known RBP	18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	SMS	P52788	366 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	NRG3	P56975	720 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	KCNJ2	P63252	427 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	IFFO1	Q0D2I5	559 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	FOXO1	Q12778	655 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	ART3	Q13508	389 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	PCLAF	Q15004	111 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	RPS6KA2	Q15349	733 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	GALNT18	Q6P9A2	607 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	EMB	Q6PCB8	327 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	FAM111B	Q6SJ93	734 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	C3P1	Q6ZMU1	363 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	OR5M3	Q8NGP4	307 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	C16orf78	Q8WTQ4	265 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	ADIPOR1	Q96A54	375 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	CNIH4	Q9P003	139 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	BCAP29	Q9UHQ4	241 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	CFL2	Q9Y281	166 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	DTX4	Q9Y2E6	619 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	LIPG	Q9Y5X9	500 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	NCKAP5	O14513	1909 aa		18.19	■□□□□ 0.5
SMC4-222	ENST00000490207	ZNF407	Q9C0G0	2248 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207		E9PLN8	166 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	LRAT	O95237	230 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	S1PR1	P21453	382 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	GSTM5	P46439	218 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	MGAT2	Q10469	447 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	MAP4K2	Q12851	820 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	HEPACAM	Q14CZ8	416 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	EXOSC7	Q15024	291 aa	Known RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	LTB4R	Q15722	352 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	HYAL4	Q2M3T9	481 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	SPDYA	Q5MJ70	313 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	TMEM64	Q6YI46	380 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	TRABD2A	Q86V40	505 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	C10orf107	Q8IVU9	208 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	C17orf47	Q8NEP4	570 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	ADCY4	Q8NFM4	1077 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	CDC26	Q8NHZ8	85 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	PHF10	Q8WUB8	498 aa	Known RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	EXOSC8	Q96B26	276 aa	Known RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	C11orf24	Q96F05	449 aa	Predicted RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	ZNF681	Q96N22	645 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	VKORC1	Q9BQB6	163 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	SHCBP1L	Q9BZQ2	653 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	TNFRSF12A	Q9NP84	129 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	GIMAP4	Q9NUV9	329 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	SIRT5	Q9NXA8	310 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	LGALS13	Q9UHV8	139 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	CNOT11	Q9UKZ1	510 aa	Known RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	BOK	Q9UMX3	212 aa	Predicted RBP	18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	ENTPD4	Q9Y227	616 aa		18.18	■□□□□ 0.5
SMC4-222	ENST00000490207	KLF2	Q9Y5W3	355 aa	Predicted RBP	18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms