RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PRSS58Q8IYP2 241 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 OR7G1Q8NGA0 311 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 FBXO27Q8NI29 283 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 ZFP90Q8TF47 636 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 DAZLQ92904 295 aaKnown RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 RIT1Q92963 219 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 NEURL3Q96EH8 262 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 FAM120BQ96EK7 910 aaKnown RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 MS4A4EQ96PG1 132 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 SH3GL1Q99961 368 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 SLC35A5Q9BS91 424 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 EPS8L2Q9H6S3 715 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 C3orf14Q9HBI5 128 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 SPAG4Q9NPE6 437 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 DDX18Q9NVP1 670 aaKnown RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 TAS2R1Q9NYW7 299 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 DKK4Q9UBT3 224 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 AP3M1Q9Y2T2 418 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 LOC101059948A0A1B0GTJ6 334 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 EMC8O43402 210 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 DNAJA2O60884 412 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 COQ9O75208 318 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 CPSF4O95639 269 aaKnown RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 IGKV3-11P04433 115 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ADRB1P08588 477 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 CT62P0C5K7 136 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 S1PR1P21453 382 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 SLC6A2P23975 617 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 SOAT1P35610 550 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 MXRA7P84157 204 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 FADDQ13158 208 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 GTDC1Q4AE62 458 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 RUNDC3AQ59EK9 446 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 DGAT2L6Q6ZPD8 337 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 RINLQ6ZS11 566 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 SHISA6Q6ZSJ9 500 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF621Q6ZSS3 439 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ASRGL1Q7L266 308 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 IL22RA1Q8N6P7 574 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 MORN4Q8NDC4 146 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 OR7G2Q8NG99 324 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 HOXB13Q92826 284 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 KIAA1143Q96AT1 154 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 WDR77Q9BQA1 342 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 RAD21L1Q9H4I0 556 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 ZCCHC3Q9NUD5 404 aaKnown RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 PRPF19Q9UMS4 504 aaKnown RBP12.47□□□□□ -0.41
TRAIP-210ENST00000489948 HS3ST3B1Q9Y662 390 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
TRAIP-210ENST00000489948 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 C17orf105B2RV13 164 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CLIC1O00299 241 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 UPK1AO00322 258 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 PRAMEF2O60811 474 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 KRT75O95678 551 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 DDAH2O95865 285 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CBX7O95931 251 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 IFNA16P05015 189 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 GSNP06396 782 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 F8A1P23610 371 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 MVDP53602 400 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 FOXL2P58012 376 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 OR4D2P58180 307 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 PSME3P61289 254 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 MRPS35P82673 323 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SLC25A3Q00325 362 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CAPRIN1Q14444 709 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SSPNQ14714 243 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 EXOSC6Q5RKV6 272 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 ZCCHC12Q6PEW1 402 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 FAM111BQ6SJ93 734 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 CPEB2Q7Z5Q1 589 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 ADCY4Q8NFM4 1077 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 KAT2AQ92830 837 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 PPWD1Q96BP3 646 aaKnown RBP12.46□□□□□ -0.41
TRAIP-210ENST00000489948 GIMAP5Q96F15 307 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 VPS50Q96JG6 964 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SLC39A3Q9BRY0 314 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF700Q9H0M5 742 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms