RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LRIT2A6NDA9 550 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 UPK1BO75841 260 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 MMP11P24347 488 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 AVPR1BP47901 424 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 HMGA2P52926 109 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 UGT2B15P54855 530 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 PCBP4P57723 403 aaKnown RBP14.84□□□□□ -0.03
BRD9-208ENST00000489816 KIAA1211LQ6NV74 962 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 KCT2Q8NC54 265 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 OR4K5Q8NGD3 323 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 MTERF3Q96E29 417 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 COX14Q96I36 57 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 CEP19Q96LK0 163 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 SLC6A18Q96N87 628 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 AMDHD1Q96NU7 426 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 MKRN2Q9H000 416 aaKnown RBP14.84□□□□□ -0.03
BRD9-208ENST00000489816 MMP27Q9H306 513 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 CAPN10Q9HC96 672 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 ALPK2Q86TB3 2170 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 CPSF4LA6NMK7 179 aaKnown RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 ISM1B1AKI9 464 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 E9PQ18 207 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 HAT1O14929 419 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 DPM1O60762 260 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 CHRM4P08173 479 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 OSMP13725 252 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 AK4P27144 223 aaPredicted RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 RPS19P39019 145 aaKnown RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 KCNJ5P48544 419 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 GINS1Q14691 196 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 CST6Q15828 149 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 AGBL4Q5VU57 503 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 APOBEC4Q8WW27 367 aaKnown RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 CNRIP1Q96F85 164 aaPredicted RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 CAMK1GQ96NX5 476 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 MAPKAP1Q9BPZ7 522 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 TSSK6Q9BXA6 273 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 PLA2G12AQ9BZM1 189 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 SLC35C2Q9NQQ7 365 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 EHD3Q9NZN3 535 aa14.83□□□□□ -0.03
BRD9-208ENST00000489816 GPR55Q9Y2T6 319 aaPredicted RBP14.83□□□□□ -0.03
BRD9-208ENST00000489816 PDGFRLQ15198 375 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 VRK2Q86Y07 508 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 FRMD1Q8N878 549 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 Q8N9G6 341 aaPredicted RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 OR52E1Q8NGJ3 308 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 LRR1Q96L50 414 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ZNF607Q96SK3 696 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 CD93Q9NPY3 652 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 FKBP14Q9NWM8 211 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 A4GNTQ9UNA3 340 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ZFR2Q9UPR6 939 aaKnown RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 H0Y8X5 98 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 HBQ1P09105 142 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 CXCR2P25025 360 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 MC3RP41968 323 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 CAV3P56539 151 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ZNF91Q05481 1191 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 PRDX1Q06830 199 aaKnown RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 TAB1Q15750 504 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 TMEM52BQ4KMG9 183 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 DESI1Q6ICB0 168 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 IKBIPQ70UQ0 350 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 OR9A2Q8NGT5 310 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 HCAR2Q8TDS4 363 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 SLC9A6Q92581 669 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ZNF354BQ96LW1 612 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 OPALINQ96PE5 141 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ASPNQ9BXN1 380 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 HHATLQ9HCP6 504 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 MRPS30Q9NP92 439 aaKnown RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 PAIP2BQ9ULR5 123 aaKnown RBP14.83□□□□□ -0.04
BRD9-208ENST00000489816 ICKQ9UPZ9 632 aa14.83□□□□□ -0.04
BRD9-208ENST00000489816 ZNF860A6NHJ4 632 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 CCRL2O00421 344 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 AQP9O43315 295 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 DNAJB6O75190 326 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 CSO75390 466 aaKnown RBP14.82□□□□□ -0.04
BRD9-208ENST00000489816 KCNK2O95069 426 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 EML2O95834 649 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 EPPINO95925 133 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 CLEC2LP0C7M8 214 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 OLR1P78380 273 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 SPHARQ15513 63 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 SNAPC1Q16533 368 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 CELF2-AS1Q8N7Q2 184 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 ZNF513Q8N8E2 541 aaPredicted RBP14.82□□□□□ -0.04
BRD9-208ENST00000489816 ACOT4Q8N9L9 421 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 OR9Q1Q8NGQ5 310 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 CCL4L1Q8NHW4 92 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 PPP1R14BQ96C90 147 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 NEUROD4Q9HD90 331 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 POU2F3Q9UKI9 436 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 MKLN1Q9UL63 735 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 TBC1D3DA0A087WVF3 549 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 TBC1D3IA0A087WXS9 549 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 TBC1D3EA0A087X179 549 aa14.82□□□□□ -0.04
BRD9-208ENST00000489816 TBC1D3KA0A087X1G2 549 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms