RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 KRT35Q92764 455 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 S100PBPQ96BU1 408 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 SERINC2Q96SA4 455 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 TCF12Q99081 682 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 AIF1LQ9BQI0 150 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 SOX7Q9BT81 388 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 METTL7AQ9H8H3 244 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 PLSCR4Q9NRQ2 329 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 ERVK-19Q9WJR5 959 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 GPR52Q9Y2T5 361 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 SYCE3A1L190 88 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 ERI2A8K979 691 aaKnown RBP13.45□□□□□ -0.26
UFD1-209ENST00000489406 TRIM77I1YAP6 450 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 CBR3O75828 277 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 LY6HO94772 140 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 F7P08709 466 aaPredicted RBP13.45□□□□□ -0.26
UFD1-209ENST00000489406 GUSBP1Q15486 140 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 ZNF619Q8N2I2 560 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 OR56A3Q8NH54 315 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 FNDC9Q8TBE3 224 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
UFD1-209ENST00000489406 PINK1Q9BXM7 581 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 METTL17Q9H7H0 456 aaPredicted RBP13.45□□□□□ -0.26
UFD1-209ENST00000489406 PARVBQ9HBI1 364 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 ETNK1Q9HBU6 452 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 GALNT9Q9HCQ5 603 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
UFD1-209ENST00000489406 KLHL42Q9P2K6 505 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 DHRS7Q9Y394 339 aa13.45□□□□□ -0.26
UFD1-209ENST00000489406 IGHV4-61A0A0C4DH41 118 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 DPRXA6NFQ7 191 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 BTNL10A8MVZ5 291 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 VWC2LB2RUY7 222 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 H0YC42 278 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 FGF17O60258 216 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 CDH16O75309 829 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 ZNF189O75820 626 aaPredicted RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 CSF3P09919 207 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 SLC37A1P57057 533 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 LGALS3BPQ08380 585 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 ZNF267Q14586 743 aaPredicted RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 DUPD1Q68J44 220 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 DESI1Q6ICB0 168 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 C11orf71Q6IPW1 123 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 CES3Q6UWW8 571 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 CENPUQ71F23 418 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 TMPRSS11BQ86T26 416 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 WDSUB1Q8N9V3 476 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 BTBD9Q96Q07 612 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 GPR21Q99679 349 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 RBM4Q9BWF3 364 aaKnown RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 OR10A4Q9H209 315 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 COPS7BQ9H9Q2 264 aaPredicted RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 SNX15Q9NRS6 342 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 ANO10Q9NW15 660 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 WHRNQ9P202 907 aa13.44□□□□□ -0.26
UFD1-209ENST00000489406 EXO1Q9UQ84 846 aaKnown RBP13.44□□□□□ -0.26
UFD1-209ENST00000489406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
UFD1-209ENST00000489406 C2orf92A0A1B0GVN3 265 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 E7EVH7 732 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 LINC01387J3KSC0 135 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 ICOSLGO75144 302 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 NR4A2P43354 598 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 NEK2P51955 445 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CDH11P55287 796 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CLDN15P56746 228 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 SESN2P58004 480 aaPredicted RBP13.43□□□□□ -0.26
UFD1-209ENST00000489406 COPS2P61201 443 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 IQCB1Q15051 598 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 TAB1Q15750 504 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 BCL2A1Q16548 175 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 SLC30A6Q6NXT4 461 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CASC4Q6P4E1 433 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 NXPE4Q6UWF7 544 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 ZNF793Q6ZN11 406 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 RINLQ6ZS11 566 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 OR2L5Q8NG80 312 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CD200R1Q8TD46 325 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 ZNF418Q8TF45 676 aaPredicted RBP13.43□□□□□ -0.26
UFD1-209ENST00000489406 MAPKAP1Q9BPZ7 522 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 OSBPL11Q9BXB4 747 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 PELI2Q9HAT8 420 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CBLN4Q9NTU7 201 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 CLEC4AQ9UMR7 237 aa13.43□□□□□ -0.26
UFD1-209ENST00000489406 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
UFD1-209ENST00000489406 ALDOAP04075 364 aaKnown RBP13.42□□□□□ -0.26
UFD1-209ENST00000489406 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms