RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CEACAM20Q6UY09 585 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SLC36A4Q6YBV0 504 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PRSS48Q7RTY5 328 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 UBE3DQ7Z6J8 389 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF605Q86T29 641 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 FAM124AQ86V42 546 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 AMIGO1Q86WK6 493 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 RBM12BQ8IXT5 1001 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 ADGRF3Q8IZF5 1079 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 AVL9Q8NBF6 648 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 OR56A1Q8NGH5 318 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 NFKBIDQ8NI38 313 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 BBS10Q8TAM1 723 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 NT5CQ8TCD5 201 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PROX1Q92786 737 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 MUL1Q969V5 352 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 GAL3ST3Q96A11 431 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 C12orf43Q96C57 262 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 MS4A6EQ96DS6 147 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 DHRS1Q96LJ7 313 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 TEFMQ96QE5 360 aaKnown RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 CXorf36Q9H7Y0 433 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PALMDQ9NP74 551 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 LHX9Q9NQ69 397 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SLC35C2Q9NQQ7 365 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 TM7SF3Q9NS93 570 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 SIRT3Q9NTG7 399 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-207ENST00000489357 GIMAP4Q9NUV9 329 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 MS4A12Q9NXJ0 267 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 VNN3Q9NY84 501 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 NCDNQ9UBB6 729 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 PLAGL1Q9UM63 463 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 LIPT1Q9Y234 373 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 DGKBQ9Y6T7 804 aa7.99□□□□□ -1.13
VTI1A-207ENST00000489357 GSAPA4D1B5 854 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 SH3D21A4FU49 640 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 H3BMQ9 156 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 TMPRSS11DO60235 418 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 MFN2O95140 757 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 GADD45GO95257 159 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ADAP00813 363 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 GBAP04062 536 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 FHP07954 510 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 F3P13726 295 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CCNA2P20248 432 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 PRKACGP22612 351 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ACVR2AP27037 513 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 AKT2P31751 481 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 MPIP34949 423 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 GGT2P36268 569 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CCT3P49368 545 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CCR5P51681 352 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CRISP3P54108 245 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 PRR5P85299 388 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 C16orf72Q14CZ0 275 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 MAD2L1BPQ15013 274 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 NDUFA9Q16795 377 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 MEP1AQ16819 746 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CTU2Q2VPK5 515 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 SPDYE7PQ495Y7 208 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 NDUFAF5Q5TEU4 345 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 SLC48A1Q6P1K1 146 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ABHD17CQ6PCB6 329 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 KIAA1324Q6UXG2 1013 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 C6orf120Q7Z4R8 191 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF438Q7Z4V0 828 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ADCK2Q7Z695 626 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 TSEN54Q7Z6J9 526 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ANKRD13BQ86YJ7 626 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 P3H2Q8IVL5 708 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ZSCAN1Q8NBB4 408 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 OR10G2Q8NGC3 310 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 PHF10Q8WUB8 498 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 SLC38A5Q8WUX1 472 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 APOBEC4Q8WW27 367 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 EDARADDQ8WWZ3 215 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 LCN9Q8WX39 176 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 RSC1A1Q92681 617 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 MAL2Q969L2 176 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 TMIGD2Q96BF3 282 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ERLEC1Q96DZ1 483 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 TOE1Q96GM8 510 aaKnown RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 ZNF354BQ96LW1 612 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 COG8Q96MW5 612 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 AMDHD1Q96NU7 426 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 CITED4Q96RK1 184 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 DPH7Q9BTV6 452 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 RIBC2Q9H4K1 309 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 SOX17Q9H6I2 414 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 EVA1AQ9H8M9 152 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 TRIM45Q9H8W5 580 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-207ENST00000489357 C3orf14Q9HBI5 128 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 FGF22Q9HCT0 170 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 NECTIN3Q9NQS3 549 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
VTI1A-207ENST00000489357 POT1Q9NUX5 634 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms