RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DNAJC13O75165 2243 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 SPENQ96T58 3664 aaKnown RBP13.21□□□□□ -0.3
BRCA1-218ENST00000489037 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 ASNA1O43681 348 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 SEMA7AO75326 666 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 CHRNGP07510 517 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 CT62P0C5K7 136 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 DDCP20711 480 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 CNR1P21554 472 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 PRPH2P23942 346 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 GPR85P60893 370 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 RPP38P78345 283 aaKnown RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 C4orf17Q53FE4 359 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 SH2D4BQ5SQS7 431 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 SLC22A10Q63ZE4 541 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 ZCCHC23Q6ZST2 131 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 FAM47EQ6ZV65 393 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 CCDC116Q8IYX3 515 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 GHDCQ8N2G8 530 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 FAM13CQ8NE31 585 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 SPACA9Q96E40 222 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 PGM2Q96G03 612 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 FAM173AQ9BQD7 235 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 TSPAN10Q9H1Z9 355 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-218ENST00000489037 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 MYNNQ9NPC7 610 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 SLC35C2Q9NQQ7 365 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 PRODH2Q9UF12 536 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 ACTL7BQ9Y614 415 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 ICE1Q9Y2F5 2266 aa13.2□□□□□ -0.3
BRCA1-218ENST00000489037 PTPN13Q12923 2485 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 TRGV8A0A0C4DH27 118 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 WDR91A4D1P6 747 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 TP53I11O14683 189 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 BIRC5O15392 142 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 LRRTM2O43300 516 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ZWINTO95229 277 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 STSP08842 583 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 LINC00032P0C843 101 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 DDX5P17844 614 aaKnown RBP13.19□□□□□ -0.3
BRCA1-218ENST00000489037 NTSP30990 170 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 SERPINB4P48594 390 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 PAOXQ6QHF9 649 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 RGS9BPQ6ZS82 235 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 FAM9CQ8IZT9 166 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ZNF615Q8N8J6 731 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ZFP62Q8NB50 900 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ADCY4Q8NFM4 1077 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 AGR3Q8TD06 166 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 TWIST2Q8WVJ9 160 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ERP27Q96DN0 273 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 CCT7Q99832 543 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 SUCOQ9UBS9 1254 aaKnown RBP13.19□□□□□ -0.3
BRCA1-218ENST00000489037 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-218ENST00000489037 TMED5Q9Y3A6 229 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 DNAJC15Q9Y5T4 150 aa13.19□□□□□ -0.3
BRCA1-218ENST00000489037 USP9XQ93008 2570 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 NPIPB8E9PQR5 432 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 HSPA4LO95757 839 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 CLPSP04118 112 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 FBXO45P0C2W1 286 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 ABOP16442 354 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 MAPK1P28482 360 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 RFC3P40938 356 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 ETV4P43268 484 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 DCAF7P61962 342 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 FAM71E1Q6IPT2 247 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 FAM180BQ6P0A1 224 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 MTFR2Q6P444 385 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 TICAM1Q8IUC6 712 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 C17orf47Q8NEP4 570 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 C16orf52Q8NHV5 167 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 ZNF675Q8TD23 568 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 PPP3R2Q96LZ3 170 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
BRCA1-218ENST00000489037 CCL27Q9Y4X3 112 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 NPFFR2Q9Y5X5 522 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 PCNX1Q96RV3 2341 aa13.18□□□□□ -0.3
BRCA1-218ENST00000489037 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms