RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CBX7O95931 251 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF763Q0D2J5 394 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 HEPACAMQ14CZ8 416 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 LTB4RQ15722 352 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 IMPG1Q17R60 797 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 C4orf17Q53FE4 359 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 TRMT12Q53H54 448 aaKnown RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 FAM71E1Q6IPT2 247 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 NOXRED1Q6NXP6 359 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 CCDC116Q8IYX3 515 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 CLYBLQ8N0X4 340 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 LRRC25Q8N386 305 aaPredicted RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 VWA5B2Q8N398 1253 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 ADCY4Q8NFM4 1077 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 OR2M7Q8NG81 312 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 RELTQ969Z4 430 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 TP53INP1Q96A56 240 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 METTL2AQ96IZ6 378 aaKnown RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 FCRL1Q96LA6 429 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 GAL3ST4Q96RP7 486 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 SSU72Q9NP77 194 aaKnown RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC35C2Q9NQQ7 365 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 RYDENQ9NUL5 291 aaKnown RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 TAS2R7Q9NYW3 318 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 EHD3Q9NZN3 535 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF835Q9Y2P0 537 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 POLR3HQ9Y535 204 aaPredicted RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF780BQ9Y6R6 833 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 USP9YO00507 2555 aaPredicted RBP14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 C2orf92A0A1B0GVN3 265 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC28A1O00337 649 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 LRRTM2O43300 516 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 FBXO45P0C2W1 286 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 LINC00032P0C843 101 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 DHRS4L1P0CG22 281 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 CCL3P10147 92 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF24P17028 368 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 DDCP20711 480 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 CNR1P21554 472 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 TACR1P25103 407 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 RFC3P40938 356 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 SERPINB4P48594 390 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 FOXO1Q12778 655 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 BEND6Q5SZJ8 279 aaPredicted RBP14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 LRIG3Q6UXM1 1119 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 TMEM64Q6YI46 380 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 C17orf47Q8NEP4 570 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC22A8Q8TCC7 542 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF675Q8TD23 568 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 PAQR8Q8TEZ7 354 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 EXOSC8Q96B26 276 aaKnown RBP14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 SPACA9Q96E40 222 aaPredicted RBP14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 PGM2Q96G03 612 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 BRINP2Q9C0B6 783 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 LRTM1Q9HBL6 345 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 PROK2Q9HC23 129 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 MYNNQ9NPC7 610 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 C1orf109Q9NX04 203 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 DTX4Q9Y2E6 619 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 WBP11Q9Y2W2 641 aaKnown RBP14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 FIS1Q9Y3D6 152 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 PTPN13Q12923 2485 aa14.71□□□□□ -0.05
CTDSP1-209ENST00000488627 G3V3Y1 287 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 SEC22BO75396 215 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 GLSO94925 669 aaPredicted RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 PCSK2P16519 638 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 GPX3P22352 226 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 SERPINB5P36952 375 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 NR0B1P51843 470 aaKnown RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 C2orf80Q0P641 193 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 EXOSC7Q15024 291 aaKnown RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 RFTN2Q52LD8 501 aaPredicted RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 ZNF628Q5EBL2 1059 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 FGD2Q7Z6J4 655 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 SAMD14Q8IZD0 417 aaPredicted RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 EGLN2Q96KS0 407 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 EML4Q9HC35 981 aaKnown RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 ZDHHC2Q9UIJ5 367 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 ACTL7BQ9Y614 415 aa14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 CHCHD2Q9Y6H1 151 aaPredicted RBP14.7□□□□□ -0.06
CTDSP1-209ENST00000488627 ZGRF1Q86YA3 2104 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 MYO1GB0I1T2 1018 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 LSM1O15116 133 aaKnown RBP14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 ZNHIT1O43257 154 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 RGS14O43566 566 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 HS6ST1O60243 411 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 SLC19A2O60779 497 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 NEFHP12036 1026 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 EMDP50402 254 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 MRPS35P82673 323 aaKnown RBP14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 HSF1Q00613 529 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 NTRK2Q16620 822 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 CMPK2Q5EBM0 449 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 SH2D4BQ5SQS7 431 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 C1QL3Q5VWW1 255 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 SLC22A10Q63ZE4 541 aa14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 BNC2Q6ZN30 1099 aaPredicted RBP14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 Q6ZPB1 254 aaPredicted RBP14.69□□□□□ -0.06
CTDSP1-209ENST00000488627 TICAM1Q8IUC6 712 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms