RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ATP6AP2A0A1C7CYW4 349 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 HMGB1P1B2RPK0 211 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-207ENST00000488591 ATP6AP2O75787 350 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 CT62P0C5K7 136 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 SDC1P18827 310 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 NTSP30990 170 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 KCNC4Q03721 635 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 MAD2L1Q13257 205 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-207ENST00000488591 PDCD2Q16342 344 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-207ENST00000488591 PIGGQ5H8A4 983 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 IL20RBQ6UXL0 311 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 FAM9CQ8IZT9 166 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 ADCY4Q8NFM4 1077 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 TP53INP1Q96A56 240 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 C3orf30Q96M34 536 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 TSSK3Q96PN8 268 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 SORT1Q99523 831 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 WWTR1Q9GZV5 400 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 MANSC1Q9H8J5 431 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 MAT2BQ9NZL9 334 aa13.95□□□□□ -0.18
CXCL12-207ENST00000488591 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
CXCL12-207ENST00000488591 KLF13Q9Y2Y9 288 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-207ENST00000488591 PRRC2CQ9Y520 2896 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 KLRC4-KLRK1H3BQV0 150 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 NME2P1O60361 137 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 SLITRK5O94991 958 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 OR6B1O95007 311 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 PRPS2P11908 318 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 BCKDHAP12694 445 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 NME2P22392 152 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 TACR1P25103 407 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 RPL3P39023 403 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 SOX3P41225 446 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 ELOAQ14241 798 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 EBPQ15125 230 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 C6orf136Q5SQH8 315 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 FAM111BQ6SJ93 734 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 RTL4Q6ZR62 310 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 GALNTL5Q7Z4T8 443 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 DND1Q8IYX4 353 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 TAGAPQ8N103 731 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF615Q8N8J6 731 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF675Q8TD23 568 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 FAR1Q8WVX9 515 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 GFM2Q969S9 779 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 CTHRC1Q96CG8 243 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 ERP27Q96DN0 273 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 SGCZQ96LD1 299 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 BARD1Q99728 777 aaKnown RBP13.94□□□□□ -0.18
CXCL12-207ENST00000488591 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 REEP4Q9H6H4 257 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 OLAHQ9NV23 265 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 PRODH2Q9UF12 536 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 BAIAP2L1Q9UHR4 511 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 ZNF639Q9UID6 485 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 HAO1Q9UJM8 370 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 NTNG1Q9Y2I2 539 aa13.94□□□□□ -0.18
CXCL12-207ENST00000488591 CAPN14A8MX76 684 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 MYO1GB0I1T2 1018 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 AKAP10O43572 662 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 LRATO95237 230 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 CLPSP04118 112 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 S1PR1P21453 382 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 HPCAL1P37235 193 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 NR0B1P51843 470 aaKnown RBP13.93□□□□□ -0.18
CXCL12-207ENST00000488591 NCBP2P52298 156 aaKnown RBP eCLIP13.93□□□□□ -0.18
CXCL12-207ENST00000488591 NRG3P56975 720 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 DUSP2Q05923 314 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 MGAT2Q10469 447 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 LTB4RQ15722 352 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 CEBPEQ15744 281 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 SMU1Q2TAY7 513 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 TRMT12Q53H54 448 aaKnown RBP13.93□□□□□ -0.18
CXCL12-207ENST00000488591 TTMPQ5BVD1 217 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 IL23RQ5VWK5 629 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 LIX1Q8N485 282 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 OR52R1Q8NGF1 315 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 OR9A2Q8NGT5 310 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 C16orf52Q8NHV5 167 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 PPCDCQ96CD2 204 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 MTERF3Q96E29 417 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 PPP1R36Q96LQ0 422 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 HES7Q9BYE0 225 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
CXCL12-207ENST00000488591 EXO1Q9UQ84 846 aaKnown RBP13.93□□□□□ -0.18
CXCL12-207ENST00000488591 FASNP49327 2511 aaKnown RBP13.93□□□□□ -0.18
CXCL12-207ENST00000488591 GCN1Q92616 2671 aaKnown RBP13.92□□□□□ -0.18
CXCL12-207ENST00000488591 TCP11X1B4DZS4 312 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 SLCO1B7G3V0H7 640 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 KLF11O14901 512 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 PDPK1O15530 556 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 TBX19O60806 448 aa13.92□□□□□ -0.18
CXCL12-207ENST00000488591 SNNO75324 88 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms