RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NCKAP5O14513 1909 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 TMEM233B4DJY2 109 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ERAL1O75616 437 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 CBX7O95931 251 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 BPGMP07738 259 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 CSNK2A2P19784 350 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 GPR85P60893 370 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ALDH6A1Q02252 535 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 BTKQ06187 659 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 FOXO1Q12778 655 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 LTB4RQ15722 352 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ARL13AQ5H913 290 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 OPN5Q6U736 354 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ZCCHC23Q6ZST2 131 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 SLC15A4Q8N697 577 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 FAM76AQ8TAV0 307 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 RELTQ969Z4 430 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 METTL2AQ96IZ6 378 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 SGCZQ96LD1 299 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 FAIM2Q9BWQ8 316 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 SSU72Q9NP77 194 aaKnown RBP13.11□□□□□ -0.31
COL9A2-208ENST00000488463 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■■ 31.7
COL9A2-208ENST00000488463 EHD3Q9NZN3 535 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 UTS2RQ9UKP6 389 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
COL9A2-208ENST00000488463 UQCRHLA0A096LP55 91 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 KLRC4-KLRK1H3BQV0 150 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 LRRTM2O43300 516 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ASNA1O43681 348 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 GLSO94925 669 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 CCL3P10147 92 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ZNF24P17028 368 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 GPX3P22352 226 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 TACR1P25103 407 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 RFC3P40938 356 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 TRMT12Q53H54 448 aaKnown RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 CMPK2Q5EBM0 449 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 SPDYAQ5MJ70 313 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 NOXRED1Q6NXP6 359 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 RTL4Q6ZR62 310 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 SLC29A4Q7RTT9 530 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 VWA5B2Q8N398 1253 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 FAM98AQ8NCA5 519 aaKnown RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ADCY4Q8NFM4 1077 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 OR2M7Q8NG81 312 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 ZNF675Q8TD23 568 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 PAQR8Q8TEZ7 354 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 NTNG2Q96CW9 530 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 OR10A5Q9H207 317 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 MYNNQ9NPC7 610 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 PSME2Q9UL46 239 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 CHCHD2Q9Y6H1 151 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-208ENST00000488463 FREM3P0C091 2139 aa13.1□□□□□ -0.31
COL9A2-208ENST00000488463 C2orf92A0A1B0GVN3 265 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-208ENST00000488463 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 GP1BBP13224 206 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 DDCP20711 480 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 NT5EP21589 574 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 GSTM5P46439 218 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 SERPINB4P48594 390 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 EMDP50402 254 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 ZNF763Q0D2J5 394 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
COL9A2-208ENST00000488463 NTRK2Q16620 822 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 C1QL3Q5VWW1 255 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 LRIG3Q6UXM1 1119 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 TMEM64Q6YI46 380 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 LRRC25Q8N386 305 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-208ENST00000488463 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
COL9A2-208ENST00000488463 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 PGM2Q96G03 612 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 EGLN2Q96KS0 407 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 GAL3ST4Q96RP7 486 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms