RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 MMP11P24347 488 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 GJA4P35212 333 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PRKAG1P54619 331 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ALDH6A1Q02252 535 aaKnown RBP11.63□□□□□ -0.55
PTCD2-204ENST00000486995 AGERQ15109 404 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 SPHARQ15513 63 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CST6Q15828 149 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ZNF750Q32MQ0 723 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TMEM35AQ53FP2 167 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 C2orf27AQ580R0 203 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TANGO2Q6ICL3 276 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CD300LDQ6UXZ3 194 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KRT73Q86Y46 540 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 RAB42Q8N4Z0 105 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KLK6Q92876 244 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 GPA33Q99795 319 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 YIPF4Q9BSR8 244 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 BCL2L10Q9HD36 194 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ZSCAN32Q9NX65 697 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TVP23BQ9NYZ1 205 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ZFR2Q9UPR6 939 aaKnown RBP11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KCNK6Q9Y257 313 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PLEKHM1Q9Y4G2 1056 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ASB4Q9Y574 426 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 A0A1W2PR48 441 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PRKYO43930 277 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KCNK2O95069 426 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 LGI1O95970 557 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 HBQ1P09105 142 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PPP2R1BP30154 601 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PKLRP30613 574 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 DUSP2Q05923 314 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 SLAMF1Q13291 335 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 SLC9A5Q14940 896 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 RNLSQ5VYX0 342 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 MORN4Q8NDC4 146 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TTLQ8NG68 377 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 OR4K5Q8NGD3 323 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 OR8K5Q8NH50 307 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 SUN3Q8TAQ9 357 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 MS4A6EQ96DS6 147 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CNPPD1Q9BV87 410 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 FNDC11Q9BVV2 318 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 FAIM2Q9BWQ8 316 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 NUAK2Q9H093 628 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 PRDM7Q9NQW5 492 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ATG4BQ9Y4P1 393 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 KDM1AO60341 852 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 ERAL1O75616 437 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 ALPPL2P10696 532 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 SPNP16150 400 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 RPS19P39019 145 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 CRYBB2P43320 205 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 MAN2A2P49641 1150 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 COX10Q12887 443 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 MRM1Q6IN84 353 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 HDDC3Q8N4P3 179 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 FAM26EQ8N5C1 309 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 IL17RCQ8NAC3 791 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 OR2L8Q8NGY9 312 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 BBS10Q8TAM1 723 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 CNRIP1Q96F85 164 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 BBS4Q96RK4 519 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 SDHCQ99643 169 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 RSPH9Q9H1X1 276 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 SLC6A20Q9NP91 592 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 STON1Q9Y6Q2 735 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 DOCK9Q9BZ29 2069 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 A0A075B6Q4 140 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 A0A1W2PP55 124 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 A0A1W2PS29 197 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 OR52A4PA6NMU1 304 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 ERI3O43414 337 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 SNX4O95219 450 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 HMGN2P05204 90 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 ALOX12P18054 663 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 MAGP20916 626 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 HIST1H1TP22492 207 aaPredicted RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 NTSP30990 170 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 GIPRP48546 466 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 PCYT1AP49585 367 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 KHKP50053 298 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 EFNB1P98172 346 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 RUNX3Q13761 415 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 LASP1Q14847 261 aaKnown RBP11.62□□□□□ -0.55
PTCD2-204ENST00000486995 SLC25A30Q5SVS4 291 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 ACSM5Q6NUN0 579 aa11.62□□□□□ -0.55
PTCD2-204ENST00000486995 C1orf94Q6P1W5 598 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms