RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NHLRC3Q5JS37 347 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 ADNP2Q6IQ32 1131 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 NCEH1Q6PIU2 408 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 LRFN4Q6PJG9 635 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 CAMKMTQ7Z624 323 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 GPR135Q8IZ08 494 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 WDR20Q8TBZ3 569 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RADILQ96JH8 1075 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 RSPO3Q9BXY4 272 aaPredicted RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 POLDIP3Q9BY77 421 aaKnown RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 DPAGT1Q9H3H5 408 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 DNAJC11Q9NVH1 559 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 SPATA6Q9NWH7 488 aaPredicted RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 ZNF624Q9P2J8 865 aaPredicted RBP10.09□□□□□ -0.79
CCDC171-208ENST00000486641 ST3GAL5Q9UNP4 418 aa10.09□□□□□ -0.79
CCDC171-208ENST00000486641 A0A1B0GVI7 797 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 MGAT4DA6NG13 374 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CD8B2A6NJW9 211 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 H3BNC9 293 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SMAD6O43541 496 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SH3BP5O60239 455 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SULT1A3P0DMM9 295 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SULT1A4P0DMN0 295 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CD8BP10966 210 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GINS1Q14691 196 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GPR68Q15743 365 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC5A12Q1EHB4 618 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CDKL4Q5MAI5 379 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 IDNKQ5T6J7 187 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LHFPL3Q86UP9 236 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 NR2C2APQ86WQ0 139 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC30A8Q8IWU4 369 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 STPG2Q8N412 459 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 FTMTQ8N4E7 242 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SKA2Q8WVK7 121 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 FGF11Q92914 225 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CXorf58Q96LI9 332 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 UBL7Q96S82 380 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 WRAP53Q9BUR4 548 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LINC00597Q9H2U6 94 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LDAHQ9H6V9 325 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 RC3H2Q9HBD1 1191 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 FGF20Q9NP95 211 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 TMEM161AQ9NX61 479 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CPNE7Q9UBL6 633 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 NUBP2Q9Y5Y2 271 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 KIAA1671Q9BY89 1806 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 PLXNA3P51805 1871 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 KPNA5O15131 536 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CASC3O15234 703 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 MMP20O60882 483 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 HIST1H2AGP0C0S8 130 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LIMS3P0CW19 117 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LIMS4P0CW20 117 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 HIST1H2ADP20671 130 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ITGALP20701 1170 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GIFP27352 417 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CCR7P32248 378 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ASMTP46597 345 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 EFNB1P98172 346 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 IRF8Q02556 426 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CHRNA6Q15825 494 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GSG1Q2KHT4 349 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF630Q2M218 657 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC36A2Q495M3 483 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC25A30Q5SVS4 291 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 RGS7BPQ6MZT1 257 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 LYPD4Q6UWN0 246 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 IL20RBQ6UXL0 311 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 RBM45Q8IUH3 476 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 RASGRP3Q8IV61 690 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GPR156Q8NFN8 814 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 DBF4BQ8NFT6 615 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 OR2T35Q8NGX2 323 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 GOT1L1Q8NHS2 421 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC16A10Q8TF71 515 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 APOBEC4Q8WW27 367 aaKnown RBP10.08□□□□□ -0.8
CCDC171-208ENST00000486641 HIST1H2AHQ96KK5 128 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 HIST1H2AJQ99878 128 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 H2AFJQ9BTM1 129 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SLC12A9Q9BXP2 914 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 SCPEP1Q9HB40 452 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CYSLTR2Q9NS75 346 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CRLS1Q9UJA2 301 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF175Q9Y473 711 aa10.08□□□□□ -0.8
CCDC171-208ENST00000486641 TRBV5-4A0A0C4DH59 114 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 TUBAL3A6NHL2 446 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 RGS11O94810 467 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 CD160O95971 181 aa10.07□□□□□ -0.8
CCDC171-208ENST00000486641 ACP2P11117 423 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms