RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 FAM84BQ96KN1 310 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 LINC00615Q96LM1 132 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 PPP1R36Q96LQ0 422 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SLITRK1Q96PX8 696 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 PANX1Q96RD7 426 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MCCC1Q96RQ3 725 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 TGS1Q96RS0 853 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 NPY6RQ99463 290 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 TMEM43Q9BTV4 400 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MMP27Q9H306 513 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 TTYH1Q9H313 450 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 RIMS4Q9H426 269 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 C11orf49Q9H6J7 331 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MED20Q9H944 212 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MOV10Q9HCE1 1003 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 ZFP14Q9HCL3 533 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MYOZ1Q9NP98 299 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 TUBG2Q9NRH3 451 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 RNF146Q9NTX7 359 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 TMEM45AQ9NWC5 275 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 DPP3Q9NY33 737 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SLCO1C1Q9NYB5 712 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 CCDC59Q9P031 241 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 IFNKQ9P0W0 207 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SEMA5BQ9P283 1151 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 ABCD2Q9UBJ2 740 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 RNF14Q9UBS8 474 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 ENOPH1Q9UHY7 261 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 NUP50Q9UKX7 468 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 FLVCR2Q9UPI3 526 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 EXO1Q9UQ84 846 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 KCNK6Q9Y257 313 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 KLF2Q9Y5W3 355 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 FKBP7Q9Y680 259 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 ERICH3Q5RHP9 1530 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 MYO15BQ96JP2 1530 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SF3B1O75533 1304 aaKnown RBP eCLIP3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SPATA31A5Q5VU36 1347 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 SPATA31A7Q8IWB4 1347 aa3.93□□□□□ -1.78
R3HDM1-217ENST00000486532 EVPLQ92817 2033 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 LRPPRCP42704 1394 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ABCC11Q96J66 1382 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 RAB3GAP2Q9H2M9 1393 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 A0A0J9YVX5 310 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 MEX3AA1L020 520 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 SMCO3A2RU48 225 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 C17orf102A2RUQ5 167 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 MTMR11A4FU01 709 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 CLEC18AA5D8T8 446 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 OR2W5A6NFC9 320 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ANKRD61A6NGH8 418 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 NPIPB13A6NJU9 1138 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 NPIPB4C9JG80 1138 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ST8SIA3O43173 380 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 SAP30O75446 220 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 CELF2O95319 508 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 CXCL14O95715 111 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 OXSR1O95747 527 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 PLAUP00749 431 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 LCATP04180 440 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 COX5BP10606 129 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 MSH3P20585 1137 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 CNR1P21554 472 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACKR3P25106 362 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 DPP4P27487 766 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 STX2P32856 288 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 MAGEB1P43366 347 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 RIDAP52758 137 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 NUP107P57740 925 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 UBE2G2P60604 165 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTBP60709 375 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ATP6V0D1P61421 351 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTA2P62736 377 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTG1P63261 375 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTG2P63267 376 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTC1P68032 377 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ACTA1P68133 377 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 MZT1Q08AG7 82 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 PTPRCAPQ14761 206 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 GUK1Q16774 197 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ME3Q16798 604 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 KIF19Q2TAC6 998 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ASTE1Q2TB18 679 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 C18orf21Q32NC0 220 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 POM121L1PQ3SYA9 428 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 PTPN20Q4JDL3 420 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 LGSNQ5TDP6 509 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 BSPRYQ5W0U4 402 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 WSCD1Q658N2 575 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ELP2Q6IA86 826 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ULK3Q6PHR2 472 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 DOK6Q6PKX4 331 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 ZDHHC24Q6UX98 284 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 CLEC18BQ6UXF7 455 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 C18orf65Q6ZTR6 163 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 NIPA1Q7RTP0 329 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
R3HDM1-217ENST00000486532 PTGR2Q8N8N7 351 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms