RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NACC2Q96BF6 587 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 TESCQ96BS2 214 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 CCDC124Q96CT7 223 aaKnown RBP8.8□□□□□ -1
TMEM39A-208ENST00000486159 DUS3LQ96G46 650 aaKnown RBP8.8□□□□□ -1
TMEM39A-208ENST00000486159 SH3GL1Q99961 368 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 TACO1Q9BSH4 297 aaKnown RBP8.8□□□□□ -1
TMEM39A-208ENST00000486159 HES7Q9BYE0 225 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 ACPTQ9BZG2 426 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 DPY30Q9C005 99 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 VN1R1Q9GZP7 353 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 ATG10Q9H0Y0 220 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 CCDC177Q9NQR7 707 aaPredicted RBP8.8□□□□□ -1
TMEM39A-208ENST00000486159 OLAHQ9NV23 265 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 SIRT5Q9NXA8 310 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 ANKRD10Q9NXR5 420 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 HCN3Q9P1Z3 774 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 NKX1-2Q9UD57 310 aaPredicted RBP8.8□□□□□ -1
TMEM39A-208ENST00000486159 GIMAP2Q9UG22 337 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 SH3BGRL2Q9UJC5 107 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 MKL2Q9ULH7 1088 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 C15orf41Q9Y2V0 281 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 L3MBTL1Q9Y468 752 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 LRRC42Q9Y546 428 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 DNHD1Q96M86 4753 aa8.8□□□□□ -1
TMEM39A-208ENST00000486159 SVILO95425 2214 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 LOC102723996A0A087X1L8 192 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 ZNF860A6NHJ4 632 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 AQP12BA6NM10 295 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 H0Y3Z8 333 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 FKBP9O95302 570 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 SERPINA7P05543 415 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 C1GALT1C1LP0DN25 315 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 BCKDHAP12694 445 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 NPPBP16860 134 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 HOXB6P17509 224 aaKnown RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 IL1RNP18510 177 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 PRPS1L1P21108 318 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 BCL6P41182 706 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 PIK3CBP42338 1070 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 ASMTP46597 345 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 ZFP36L2P47974 494 aaKnown RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 LRRC74AQ0VAA2 488 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 PWP1Q13610 501 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 DOC2AQ14183 400 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 KIAA0040Q15053 153 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 CDSNQ15517 529 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 SPIN4Q56A73 249 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 THEMIS2Q5TEJ8 643 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 SP5Q6BEB4 398 aaPredicted RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 MED27Q6P2C8 311 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 FAM180AQ6UWF9 173 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 LRRC74BQ6ZQY2 392 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 NCCRP1Q6ZVX7 275 aaPredicted RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 PDSS2Q86YH6 399 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 AQP12AQ8IXF9 295 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 LAS2Q8IYD9 372 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 KRT78Q8N1N4 520 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 TNIP2Q8NFZ5 429 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 OR8J3Q8NGG0 315 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 OR5T3Q8NGG3 340 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 HAS2Q92819 552 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 PYCR2Q96C36 320 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 IMMP1LQ96LU5 166 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 C1orf50Q9BV19 199 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 TGIF2Q9GZN2 237 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.79□□□□□ -14e-6■■■■□ 22
TMEM39A-208ENST00000486159 ZNF700Q9H0M5 742 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 SPNS1Q9H2V7 528 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 NT5DC2Q9H857 520 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 RMND5AQ9H871 391 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 PELI2Q9HAT8 420 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 VPS29Q9UBQ0 182 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 POLR3HQ9Y535 204 aaPredicted RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 ZFHX3Q15911 3703 aa8.79□□□□□ -1
TMEM39A-208ENST00000486159 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
TMEM39A-208ENST00000486159 FXYD1O00168 92 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 PCDH17O14917 1159 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 CASQ2O14958 399 aaPredicted RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 PEX1O43933 1283 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 RDH16O75452 317 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 ERN1O75460 977 aaKnown RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 CDC123O75794 336 aaPredicted RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 KCNH1O95259 989 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 C8BP07358 591 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 STSP08842 583 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 CD1EP15812 388 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SLC6A2P23975 617 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 RPL3P39023 403 aaKnown RBP8.78□□□□□ -1
TMEM39A-208ENST00000486159 SLC7A2P52569 658 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 NME5P56597 212 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 TBPL1P62380 186 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 CSNK1G2P78368 415 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 OLR1P78380 273 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 HMGCS1Q01581 520 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 ACSM2AQ08AH3 577 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 SGO1Q5FBB7 561 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 MFSD4BQ5TF39 518 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 ACSM2BQ68CK6 577 aa8.78□□□□□ -1
TMEM39A-208ENST00000486159 RPUSD3Q6P087 351 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms