RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CHERPQ8IWX8 916 aaKnown RBP16.28■□□□□ 0.2
COL6A1-204ENST00000486023 CCDC116Q8IYX3 515 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 LDAHQ9H6V9 325 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 EXO5Q9H790 373 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 TNFRSF10DQ9UBN6 386 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 HEY2Q9UBP5 337 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 MCM8Q9UJA3 840 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 MEMO1Q9Y316 297 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 NBPF19A0A087WUL8 3843 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 SPAG7O75391 227 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 SLU7O95391 586 aaKnown RBP16.27■□□□□ 0.2
COL6A1-204ENST00000486023 FBXO45P0C2W1 286 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 SMSP52788 366 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 FBXW4P57775 412 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 TRA2BP62995 288 aaKnown RBP16.27■□□□□ 0.2
COL6A1-204ENST00000486023 ADORA2A-AS1P86434 159 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 DUSP2Q05923 314 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 FUT7Q11130 342 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 LTB4RQ15722 352 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 SPIN4Q56A73 249 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 LYPD8Q6UX82 237 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 BNC2Q6ZN30 1099 aaPredicted RBP16.27■□□□□ 0.2
COL6A1-204ENST00000486023 Q6ZPB1 254 aaPredicted RBP16.27■□□□□ 0.2
COL6A1-204ENST00000486023 C10orf107Q8IVU9 208 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 VWA5B2Q8N398 1253 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 SLC15A4Q8N697 577 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 TMEM251Q8N6I4 163 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 ZNF615Q8N8J6 731 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 SIMC1Q8NDZ2 872 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 C16orf78Q8WTQ4 265 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 DIO2Q92813 273 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 ZBTB9Q96C00 473 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 CNRIP1Q96F85 164 aaPredicted RBP16.27■□□□□ 0.2
COL6A1-204ENST00000486023 IL1RL2Q9HB29 575 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 OXSMQ9NWU1 459 aa16.27■□□□□ 0.2
COL6A1-204ENST00000486023 MYO7BQ6PIF6 2116 aa16.27■□□□□ 0.19
COL6A1-204ENST00000486023 UNC79Q9P2D8 2635 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 SNRPB2P08579 225 aaKnown RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 CELA3AP09093 270 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 ANXA4P09525 319 aaPredicted RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 GRNP28799 593 aaKnown RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 TIA1P31483 386 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 NRG3P56975 720 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 MRPS35P82673 323 aaKnown RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 C2orf80Q0P641 193 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 SLC10A1Q14973 349 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 PRICKLE4Q2TBC4 344 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 ARHGAP11AQ6P4F7 1023 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 RPTNQ6XPR3 784 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 FRMD7Q6ZUT3 714 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 SRRM1Q8IYB3 904 aaKnown RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 LRRC25Q8N386 305 aaPredicted RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF808Q8N4W9 903 aaPredicted RBP16.26■□□□□ 0.19
COL6A1-204ENST00000486023 OR7G1Q8NGA0 311 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 OR52R1Q8NGF1 315 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 OR5M9Q8NGP3 310 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 FAM57AQ8TBR7 257 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 RDH11Q8TC12 318 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 ANKRA2Q9H9E1 313 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 TNFRSF12AQ9NP84 129 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 ALKBH4Q9NXW9 302 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 DTX4Q9Y2E6 619 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 NPFFR2Q9Y5X5 522 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 LIPGQ9Y5X9 500 aa16.26■□□□□ 0.19
COL6A1-204ENST00000486023 CAPN14A8MX76 684 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 TP53I11O14683 189 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 NME6O75414 186 aaPredicted RBP16.25■□□□□ 0.19
COL6A1-204ENST00000486023 DNAJB13P59910 316 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 MGAT2Q10469 447 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 HEPACAMQ14CZ8 416 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 BICRALQ6AI39 1079 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 ZNF585AQ6P3V2 769 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 RGS9BPQ6ZS82 235 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 FAM109AQ8N4B1 249 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 PAQR8Q8TEZ7 354 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 KAT2AQ92830 837 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 BBS4Q96RK4 519 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 DOHHQ9BU89 302 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 ITPAQ9BY32 194 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 GIMAP4Q9NUV9 329 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 MAT2BQ9NZL9 334 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 EHD3Q9NZN3 535 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 ENTPD4Q9Y227 616 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 POLR3HQ9Y535 204 aaPredicted RBP16.25■□□□□ 0.19
COL6A1-204ENST00000486023 HRH3Q9Y5N1 445 aa16.25■□□□□ 0.19
COL6A1-204ENST00000486023 GLSO94925 669 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-204ENST00000486023 ATP1B1P05026 303 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 DRD2P14416 443 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 PCSK2P16519 638 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 S1PR1P21453 382 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 GPX3P22352 226 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 HTR1EP28566 365 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 FOXO1Q12778 655 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 MAP4K2Q12851 820 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 ART3Q13508 389 aa16.24■□□□□ 0.19
COL6A1-204ENST00000486023 NTRK2Q16620 822 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms